STRINGSTRING
ABK71061.1 ABK71061.1 hemH hemH hemG hemG hemE hemE ABK75712.1 ABK75712.1 ABK74818.1 ABK74818.1 ABK73453.1 ABK73453.1 ABK73491.1 ABK73491.1 ABK74527.1 ABK74527.1 ABK74525.1 ABK74525.1 ABK70534.1 ABK70534.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71061.1Conserved hypothetical protein; Identified by match to protein family HMM PF06778. (231 aa)    
Predicted Functional Partners:
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
  
 0.965
hemG
Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.
 
  
 0.952
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.
 
  
 0.939
ABK75712.1
Conserved hypothetical protein.
 
    0.844
ABK74818.1
Conserved hypothetical protein.
  
  
 0.823
ABK73453.1
Conserved hypothetical protein.
  
  
 0.822
ABK73491.1
Conserved hypothetical protein; Belongs to the UPF0336 family.
  
  
 0.814
ABK74527.1
Conserved hypothetical protein; Belongs to the UPF0336 family.
  
  
 0.804
ABK74525.1
Conserved hypothetical protein.
   
  
 0.779
ABK70534.1
Conserved hypothetical protein.
   
  
 0.779
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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