Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK72065.1 | ABK73071.1 | MSMEG_2788 | MSMEG_3045 | ATP/GTP-binding integral membrane protein; Identified by match to protein family HMM PF03969. | Integral membrane protein. | 0.799 |
| ABK72065.1 | ABK74534.1 | MSMEG_2788 | MSMEG_2787 | ATP/GTP-binding integral membrane protein; Identified by match to protein family HMM PF03969. | Putative riboflavin biosynthesis protein RibD; Identified by match to protein family HMM PF01872. | 0.799 |
| ABK72065.1 | ABK74681.1 | MSMEG_2788 | MSMEG_3795 | ATP/GTP-binding integral membrane protein; Identified by match to protein family HMM PF03969. | Conserved hypothetical protein. | 0.776 |
| ABK72065.1 | ABK75296.1 | MSMEG_2788 | MSMEG_2665 | ATP/GTP-binding integral membrane protein; Identified by match to protein family HMM PF03969. | Conserved hypothetical protein. | 0.778 |
| ABK72065.1 | ABK75677.1 | MSMEG_2788 | MSMEG_2786 | ATP/GTP-binding integral membrane protein; Identified by match to protein family HMM PF03969. | Hydrolase, alpha/beta fold family protein; Identified by match to protein family HMM PF00561. | 0.650 |
| ABK72065.1 | ABK75821.1 | MSMEG_2788 | MSMEG_1671 | ATP/GTP-binding integral membrane protein; Identified by match to protein family HMM PF03969. | Succinate dehydrogenase hydrophobic membrane anchor protein SdhD. | 0.801 |
| ABK72065.1 | aftC | MSMEG_2788 | MSMEG_2785 | ATP/GTP-binding integral membrane protein; Identified by match to protein family HMM PF03969. | Putative conserved integral membrane protein; Involved in the biosynthesis of the arabinogalactan (AG) region of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component of the mycobacterial cell wall. Catalyzes the addition of an arabinofuranosyl (Araf) residue from the sugar donor beta-D-arabinofuranosyl-1-monophosphoryldecaprenol (DPA) on the C-3 of an alpha-(1->5)-linked Araf from the arabinan backbone of AG. | 0.624 |
| ABK72065.1 | sdhA | MSMEG_2788 | MSMEG_1670 | ATP/GTP-binding integral membrane protein; Identified by match to protein family HMM PF03969. | Succinate dehydrogenase, flavoprotein subunit; Identified by similarity to SP:P31038; match to protein family HMM PF00890; match to protein family HMM PF02910; match to protein family HMM TIGR01812; match to protein family HMM TIGR01816. | 0.783 |
| ABK72065.1 | sdhB | MSMEG_2788 | MSMEG_1669 | ATP/GTP-binding integral membrane protein; Identified by match to protein family HMM PF03969. | Succinate dehydrogenase, iron-sulfur protein; Identified by similarity to SP:P51053; match to protein family HMM TIGR00384. | 0.806 |
| ABK72065.1 | sdhC | MSMEG_2788 | MSMEG_1672 | ATP/GTP-binding integral membrane protein; Identified by match to protein family HMM PF03969. | Succinate dehydrogenase, cytochrome b556 subunit; Identified by match to protein family HMM PF01127; match to protein family HMM TIGR02970. | 0.835 |
| ABK73071.1 | ABK72065.1 | MSMEG_3045 | MSMEG_2788 | Integral membrane protein. | ATP/GTP-binding integral membrane protein; Identified by match to protein family HMM PF03969. | 0.799 |
| ABK73071.1 | ABK74681.1 | MSMEG_3045 | MSMEG_3795 | Integral membrane protein. | Conserved hypothetical protein. | 0.770 |
| ABK73071.1 | ABK75296.1 | MSMEG_3045 | MSMEG_2665 | Integral membrane protein. | Conserved hypothetical protein. | 0.775 |
| ABK73071.1 | ABK75821.1 | MSMEG_3045 | MSMEG_1671 | Integral membrane protein. | Succinate dehydrogenase hydrophobic membrane anchor protein SdhD. | 0.774 |
| ABK73071.1 | sdhA | MSMEG_3045 | MSMEG_1670 | Integral membrane protein. | Succinate dehydrogenase, flavoprotein subunit; Identified by similarity to SP:P31038; match to protein family HMM PF00890; match to protein family HMM PF02910; match to protein family HMM TIGR01812; match to protein family HMM TIGR01816. | 0.684 |
| ABK73071.1 | sdhB | MSMEG_3045 | MSMEG_1669 | Integral membrane protein. | Succinate dehydrogenase, iron-sulfur protein; Identified by similarity to SP:P51053; match to protein family HMM TIGR00384. | 0.729 |
| ABK73071.1 | sdhC | MSMEG_3045 | MSMEG_1672 | Integral membrane protein. | Succinate dehydrogenase, cytochrome b556 subunit; Identified by match to protein family HMM PF01127; match to protein family HMM TIGR02970. | 0.774 |
| ABK74534.1 | ABK72065.1 | MSMEG_2787 | MSMEG_2788 | Putative riboflavin biosynthesis protein RibD; Identified by match to protein family HMM PF01872. | ATP/GTP-binding integral membrane protein; Identified by match to protein family HMM PF03969. | 0.799 |
| ABK74534.1 | ABK75677.1 | MSMEG_2787 | MSMEG_2786 | Putative riboflavin biosynthesis protein RibD; Identified by match to protein family HMM PF01872. | Hydrolase, alpha/beta fold family protein; Identified by match to protein family HMM PF00561. | 0.834 |
| ABK74534.1 | aftC | MSMEG_2787 | MSMEG_2785 | Putative riboflavin biosynthesis protein RibD; Identified by match to protein family HMM PF01872. | Putative conserved integral membrane protein; Involved in the biosynthesis of the arabinogalactan (AG) region of the mycolylarabinogalactan-peptidoglycan (mAGP) complex, an essential component of the mycobacterial cell wall. Catalyzes the addition of an arabinofuranosyl (Araf) residue from the sugar donor beta-D-arabinofuranosyl-1-monophosphoryldecaprenol (DPA) on the C-3 of an alpha-(1->5)-linked Araf from the arabinan backbone of AG. | 0.817 |
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