STRINGSTRING
ABK71052.1 ABK71052.1 ABK72406.1 ABK72406.1 ABK75439.1 ABK75439.1 ABK72463.1 ABK72463.1 ABK73232.1 ABK73232.1 ABK70828.1 ABK70828.1 ABK75656.1 ABK75656.1 ABK76020.1 ABK76020.1 ABK74871.1 ABK74871.1 ABK72201.1 ABK72201.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71052.1Short-chain dehydrogenase/reductase SDR; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (291 aa)    
Predicted Functional Partners:
ABK72406.1
Major facilitator superfamily protein; Identified by match to protein family HMM PF07690.
 
    0.727
ABK75439.1
Conserved hypothetical protein.
  
  
 0.724
ABK72463.1
Short-chain dehydrogenase/reductase SDR.
 
 
 0.502
ABK73232.1
Two-component system response regulator; Identified by match to protein family HMM PF00196.
  
  
 0.471
ABK70828.1
Glucose-1-dehydrogenase; Identified by match to protein family HMM PF00106.
 
 
 0.468
ABK75656.1
Peptide synthetase ScpsB, putative; Identified by match to protein family HMM PF00668.
 
  
 0.449
ABK76020.1
Short-chain dehydrogenase/reductase SDR; Identified by match to protein family HMM PF00106.
 
 
 0.435
ABK74871.1
3-oxoacyl-[acyl-carrier-protein] reductase; Identified by match to protein family HMM PF00106.
 
 
 0.425
ABK72201.1
Peptide synthetase ScpsB, putative; Identified by match to protein family HMM PF00668.
 
  
 0.402
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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