Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69661.1 | ABK73624.1 | MSMEG_2848 | MSMEG_2850 | Transmembrane efflux protein; Identified by match to protein family HMM PF07690. | Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | 0.435 |
ABK69661.1 | ABK75257.1 | MSMEG_2848 | MSMEG_2849 | Transmembrane efflux protein; Identified by match to protein family HMM PF07690. | Transcriptional regulatory protein; Identified by match to protein family HMM PF01638. | 0.594 |
ABK71125.1 | ABK71432.1 | MSMEG_6580 | MSMEG_4558 | Identified by match to protein family HMM PF01638. | Conserved hypothetical protein. | 0.419 |
ABK71125.1 | ABK75257.1 | MSMEG_6580 | MSMEG_2849 | Identified by match to protein family HMM PF01638. | Transcriptional regulatory protein; Identified by match to protein family HMM PF01638. | 0.695 |
ABK71432.1 | ABK71125.1 | MSMEG_4558 | MSMEG_6580 | Conserved hypothetical protein. | Identified by match to protein family HMM PF01638. | 0.419 |
ABK71432.1 | ABK73800.1 | MSMEG_4558 | MSMEG_3013 | Conserved hypothetical protein. | Putative transcriptional regulator family protein; Identified by match to protein family HMM PF01638. | 0.424 |
ABK71432.1 | ABK73936.1 | MSMEG_4558 | MSMEG_5610 | Conserved hypothetical protein. | Putative transcriptional regulator family protein; Identified by match to protein family HMM PF01638. | 0.419 |
ABK71432.1 | ABK74038.1 | MSMEG_4558 | MSMEG_6829 | Conserved hypothetical protein. | Transcriptional regulatory protein; Identified by match to protein family HMM PF01638. | 0.419 |
ABK71432.1 | ABK75257.1 | MSMEG_4558 | MSMEG_2849 | Conserved hypothetical protein. | Transcriptional regulatory protein; Identified by match to protein family HMM PF01638. | 0.609 |
ABK73624.1 | ABK69661.1 | MSMEG_2850 | MSMEG_2848 | Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | Transmembrane efflux protein; Identified by match to protein family HMM PF07690. | 0.435 |
ABK73624.1 | ABK75257.1 | MSMEG_2850 | MSMEG_2849 | Identified by match to protein family HMM PF04075; match to protein family HMM TIGR00026. | Transcriptional regulatory protein; Identified by match to protein family HMM PF01638. | 0.574 |
ABK73800.1 | ABK71432.1 | MSMEG_3013 | MSMEG_4558 | Putative transcriptional regulator family protein; Identified by match to protein family HMM PF01638. | Conserved hypothetical protein. | 0.424 |
ABK73800.1 | ABK75257.1 | MSMEG_3013 | MSMEG_2849 | Putative transcriptional regulator family protein; Identified by match to protein family HMM PF01638. | Transcriptional regulatory protein; Identified by match to protein family HMM PF01638. | 0.628 |
ABK73936.1 | ABK71432.1 | MSMEG_5610 | MSMEG_4558 | Putative transcriptional regulator family protein; Identified by match to protein family HMM PF01638. | Conserved hypothetical protein. | 0.419 |
ABK73936.1 | ABK75257.1 | MSMEG_5610 | MSMEG_2849 | Putative transcriptional regulator family protein; Identified by match to protein family HMM PF01638. | Transcriptional regulatory protein; Identified by match to protein family HMM PF01638. | 0.688 |
ABK74038.1 | ABK71432.1 | MSMEG_6829 | MSMEG_4558 | Transcriptional regulatory protein; Identified by match to protein family HMM PF01638. | Conserved hypothetical protein. | 0.419 |
ABK74038.1 | ABK75257.1 | MSMEG_6829 | MSMEG_2849 | Transcriptional regulatory protein; Identified by match to protein family HMM PF01638. | Transcriptional regulatory protein; Identified by match to protein family HMM PF01638. | 0.632 |
ABK75257.1 | ABK69661.1 | MSMEG_2849 | MSMEG_2848 | Transcriptional regulatory protein; Identified by match to protein family HMM PF01638. | Transmembrane efflux protein; Identified by match to protein family HMM PF07690. | 0.594 |
ABK75257.1 | ABK71125.1 | MSMEG_2849 | MSMEG_6580 | Transcriptional regulatory protein; Identified by match to protein family HMM PF01638. | Identified by match to protein family HMM PF01638. | 0.695 |
ABK75257.1 | ABK71432.1 | MSMEG_2849 | MSMEG_4558 | Transcriptional regulatory protein; Identified by match to protein family HMM PF01638. | Conserved hypothetical protein. | 0.609 |
page 1 of 2