STRINGSTRING
ABK75748.1 ABK75748.1 ABK72533.1 ABK72533.1 ABK73753.1 ABK73753.1 ABK70277.1 ABK70277.1 ABK72552.1 ABK72552.1 ABK69687.1 ABK69687.1 ABK70674.1 ABK70674.1 ABK71910.1 ABK71910.1 ABK72127.1 ABK72127.1 ABK73028.1 ABK73028.1 ABK73542.1 ABK73542.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK75748.1Conserved hypothetical protein; Identified by match to protein family HMM PF02405. (281 aa)    
Predicted Functional Partners:
ABK72533.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
 0.987
ABK73753.1
Virulence factor mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.
 
 
 0.967
ABK70277.1
Virulence factor Mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.
 
 
 0.966
ABK72552.1
Virulence factor mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.
 
 
 0.965
ABK69687.1
Virulence factor Mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.
 
 
 0.959
ABK70674.1
Virulence factor Mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.
 
 
 0.959
ABK71910.1
Virulence factor Mce family protein; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.
 
 
 0.959
ABK72127.1
Conserved hypothetical protein; Identified by match to protein family HMM PF02405.
 
 
0.910
ABK73028.1
Mce-family protein mce3c; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.
 
 
 0.902
ABK73542.1
Mce-family protein mce1f; Identified by match to protein family HMM PF02470; match to protein family HMM TIGR00996.
 
 
 0.901
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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