STRINGSTRING
ABK71688.1 ABK71688.1 ABK71772.1 ABK71772.1 ABK71237.1 ABK71237.1 ABK72635.1 ABK72635.1 kstR2 kstR2 ABK74479.1 ABK74479.1 kstR kstR ABK71145.1 ABK71145.1 ABK74109.1 ABK74109.1 ABK71932.1 ABK71932.1 ABK70402.1 ABK70402.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71688.1Transcriptional regulator, PadR family protein; Identified by match to protein family HMM PF03551. (231 aa)    
Predicted Functional Partners:
ABK71772.1
Conserved hypothetical protein.
 
  
 0.849
ABK71237.1
Conserved hypothetical protein.
   
  
 0.822
ABK72635.1
3-ketosteroid dehydrogenase; Identified by match to protein family HMM PF00890.
 
    0.633
kstR2
Transcriptional regulator, TetR family protein; Controls the expression of a small regulon that may play a role in the utilization of cholesterol.
  
  
 0.630
ABK74479.1
Identified by match to protein family HMM PF03061.
 
    0.610
kstR
Transcriptional regulator, TetR family protein; Controls the expression of genes used for utilizing diverse lipids as energy sources.
  
  
 0.599
ABK71145.1
Fatty acid hydroxylase; Identified by match to protein family HMM PF04116.
 
    0.578
ABK74109.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF00498; match to protein family HMM PF01061.
 
  
 0.531
ABK71932.1
3-oxoacyl-[acyl-carrier-protein] reductase; Identified by match to protein family HMM PF00106; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
    0.478
ABK70402.1
LysA protein.
 
    0.453
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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