STRINGSTRING
ABK70449.1 ABK70449.1 ABK74361.1 ABK74361.1 ABK72698.1 ABK72698.1 ABK70843.1 ABK70843.1 carD carD ABK69744.1 ABK69744.1 ABK73925.1 ABK73925.1 tuf tuf etfB etfB ABK75868.1 ABK75868.1 ABK72599.1 ABK72599.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK70449.1NADH:flavin oxidoreductase/nadh oxidase; Identified by match to protein family HMM PF00724. (412 aa)    
Predicted Functional Partners:
ABK74361.1
NADH:flavin oxidoreductase/nadh oxidase.
     
 0.826
ABK72698.1
Conserved hypothetical protein.
  
    0.579
ABK70843.1
Stress responsive A/B Barrel Domain family protein; Identified by match to protein family HMM PF07876.
  
    0.578
carD
Transcriptional regulator, CarD family protein; Controls rRNA transcription by binding to the RNA polymerase (RNAP). Required for the stringent response to starvation, oxidative and genotoxic stresses as well as control of rRNA under normal growth conditions.
  
    0.554
ABK69744.1
Antigen 85-C; Identified by match to protein family HMM PF00756.
 
  
 0.489
ABK73925.1
Steroid delta-isomerase; Identified by match to protein family HMM PF02136.
 
    0.472
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
  
  
 0.459
etfB
Electron transfer flavoprotein, beta subunit; Identified by similarity to SP:O85691; match to protein family HMM PF01012.
  
 
 0.459
ABK75868.1
Conserved hypothetical protein.
 
  
 0.452
ABK72599.1
Conserved domain protein; Identified by match to protein family HMM PF00313.
  
  
 0.445
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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