STRINGSTRING
ABK71772.1 ABK71772.1 ABK71688.1 ABK71688.1 ABK76228.1 ABK76228.1 ABK71237.1 ABK71237.1 ABK71661.1 ABK71661.1 ABK70670.1 ABK70670.1 ABK73223.1 ABK73223.1 ABK73330.1 ABK73330.1 ABK74433.1 ABK74433.1 ABK69856.1 ABK69856.1 kstR2 kstR2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71772.1Conserved hypothetical protein. (187 aa)    
Predicted Functional Partners:
ABK71688.1
Transcriptional regulator, PadR family protein; Identified by match to protein family HMM PF03551.
 
  
 0.849
ABK76228.1
Short chain oxidoreductase; Identified by match to protein family HMM PF00106.
 
    0.823
ABK71237.1
Conserved hypothetical protein.
   
  
 0.822
ABK71661.1
Conserved hypothetical protein.
 
  
 0.716
ABK70670.1
3-alpha-hydroxysteroid dehydrogenase; Identified by match to protein family HMM PF01370.
 
     0.640
ABK73223.1
Conserved hypothetical protein.
  
    0.628
ABK73330.1
Conserved hypothetical protein; Identified by match to protein family HMM PF00296.
 
    0.593
ABK74433.1
Bile-acid 7-alpha dehydratase.
 
  
 0.572
ABK69856.1
Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF07993; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.567
kstR2
Transcriptional regulator, TetR family protein; Controls the expression of a small regulon that may play a role in the utilization of cholesterol.
   
  
 0.525
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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