STRINGSTRING
ABK75300.1 ABK75300.1 ABK76165.1 ABK76165.1 ABK74532.1 ABK74532.1 ABK75702.1 ABK75702.1 ABK73183.1 ABK73183.1 ABK70441.1 ABK70441.1 ABK71541.1 ABK71541.1 ABK72033.1 ABK72033.1 ABK71138.1 ABK71138.1 ABK71509.1 ABK71509.1 ABK72093.1 ABK72093.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK75300.1Conserved hypothetical protein. (264 aa)    
Predicted Functional Partners:
ABK76165.1
PAP2 superfamily protein; Identified by match to protein family HMM PF01569.
 
    0.732
ABK74532.1
HNH nuclease, putative.
 
    0.720
ABK75702.1
Thiocyanate hydrolase beta subunit.
  
    0.703
ABK73183.1
Conserved hypothetical protein.
 
    0.688
ABK70441.1
LprB protein.
 
    0.566
ABK71541.1
Conserved hypothetical protein.
 
    0.554
ABK72033.1
Identified by match to protein family HMM PF00106.
  
    0.544
ABK71138.1
Secreted peptidase; Identified by match to protein family HMM PF01551.
 
    0.525
ABK71509.1
Conserved hypothetical protein.
  
    0.521
ABK72093.1
Conserved hypothetical protein; Identified by match to protein family HMM PF08044.
  
    0.520
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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