Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70441.1 | ABK71138.1 | MSMEG_1396 | MSMEG_0247 | LprB protein. | Secreted peptidase; Identified by match to protein family HMM PF01551. | 0.520 |
ABK70441.1 | ABK75300.1 | MSMEG_1396 | MSMEG_2922 | LprB protein. | Conserved hypothetical protein. | 0.566 |
ABK70441.1 | ABK76165.1 | MSMEG_1396 | MSMEG_1385 | LprB protein. | PAP2 superfamily protein; Identified by match to protein family HMM PF01569. | 0.612 |
ABK71138.1 | ABK70441.1 | MSMEG_0247 | MSMEG_1396 | Secreted peptidase; Identified by match to protein family HMM PF01551. | LprB protein. | 0.520 |
ABK71138.1 | ABK75300.1 | MSMEG_0247 | MSMEG_2922 | Secreted peptidase; Identified by match to protein family HMM PF01551. | Conserved hypothetical protein. | 0.525 |
ABK71509.1 | ABK74532.1 | MSMEG_2928 | MSMEG_1275 | Conserved hypothetical protein. | HNH nuclease, putative. | 0.622 |
ABK71509.1 | ABK75300.1 | MSMEG_2928 | MSMEG_2922 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.521 |
ABK71509.1 | ABK76165.1 | MSMEG_2928 | MSMEG_1385 | Conserved hypothetical protein. | PAP2 superfamily protein; Identified by match to protein family HMM PF01569. | 0.427 |
ABK71541.1 | ABK75300.1 | MSMEG_3436 | MSMEG_2922 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.554 |
ABK72033.1 | ABK75300.1 | MSMEG_2923 | MSMEG_2922 | Identified by match to protein family HMM PF00106. | Conserved hypothetical protein. | 0.544 |
ABK72093.1 | ABK75300.1 | MSMEG_0855 | MSMEG_2922 | Conserved hypothetical protein; Identified by match to protein family HMM PF08044. | Conserved hypothetical protein. | 0.520 |
ABK73183.1 | ABK74532.1 | MSMEG_3509 | MSMEG_1275 | Conserved hypothetical protein. | HNH nuclease, putative. | 0.608 |
ABK73183.1 | ABK75300.1 | MSMEG_3509 | MSMEG_2922 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.688 |
ABK73183.1 | ABK76165.1 | MSMEG_3509 | MSMEG_1385 | Conserved hypothetical protein. | PAP2 superfamily protein; Identified by match to protein family HMM PF01569. | 0.506 |
ABK74532.1 | ABK71509.1 | MSMEG_1275 | MSMEG_2928 | HNH nuclease, putative. | Conserved hypothetical protein. | 0.622 |
ABK74532.1 | ABK73183.1 | MSMEG_1275 | MSMEG_3509 | HNH nuclease, putative. | Conserved hypothetical protein. | 0.608 |
ABK74532.1 | ABK75300.1 | MSMEG_1275 | MSMEG_2922 | HNH nuclease, putative. | Conserved hypothetical protein. | 0.720 |
ABK74532.1 | ABK75702.1 | MSMEG_1275 | MSMEG_6266 | HNH nuclease, putative. | Thiocyanate hydrolase beta subunit. | 0.718 |
ABK75300.1 | ABK70441.1 | MSMEG_2922 | MSMEG_1396 | Conserved hypothetical protein. | LprB protein. | 0.566 |
ABK75300.1 | ABK71138.1 | MSMEG_2922 | MSMEG_0247 | Conserved hypothetical protein. | Secreted peptidase; Identified by match to protein family HMM PF01551. | 0.525 |
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