STRINGSTRING
ABK71509.1 ABK71509.1 ABK74532.1 ABK74532.1 ABK74113.1 ABK74113.1 ABK72279.1 ABK72279.1 ABK73933.1 ABK73933.1 ABK74826.1 ABK74826.1 ABK69926.1 ABK69926.1 ABK72508.1 ABK72508.1 ABK75300.1 ABK75300.1 pimA pimA ABK75216.1 ABK75216.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71509.1Conserved hypothetical protein. (360 aa)    
Predicted Functional Partners:
ABK74532.1
HNH nuclease, putative.
  
    0.622
ABK74113.1
Identified by match to protein family HMM PF03061.
  
    0.556
ABK72279.1
Identified by match to protein family HMM TIGR02611.
  
    0.556
ABK73933.1
Permease binding-protein component; Identified by match to protein family HMM PF04069.
  
    0.536
ABK74826.1
Permease membrane component; Identified by match to protein family HMM PF00528.
  
    0.536
ABK69926.1
Glycine betaine/carnitine/choline transport ATP-binding protein opuCA; Identified by match to protein family HMM PF00005; match to protein family HMM PF00571; match to protein family HMM TIGR01186.
  
    0.536
ABK72508.1
ABC transporter, permease protein OpuCB; Identified by match to protein family HMM PF00528.
  
    0.535
ABK75300.1
Conserved hypothetical protein.
  
    0.521
pimA
Phosphatidylinositol alpha-mannosyltransferase; Involved in the biosynthesis of phosphatidyl-myo-inositol mannosides (PIM) which are early precursors in the biosynthesis of lipomannans (LM) and lipoarabinomannans (LAM). Catalyzes the addition of a mannosyl residue from GDP-D-mannose (GDP-Man) to the position 2 of the carrier lipid phosphatidyl-myo-inositol (PI) to generate a phosphatidyl-myo-inositol bearing an alpha-1,2-linked mannose residue (PIM1). In contrary to PimB, the mannosyltransferase PimA is unable to transfer a mannose residue to the position 6 of the phosphatidyl-myo-inos [...]
 
    0.475
ABK75216.1
Integral membrane protein.
  
    0.428
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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