STRINGSTRING
ABK73204.1 ABK73204.1 ABK74654.1 ABK74654.1 ABK73221.1 ABK73221.1 purU purU ABK72688.1 ABK72688.1 ABK73456.1 ABK73456.1 ABK70053.1 ABK70053.1 ABK71196.1 ABK71196.1 ABK70166.1 ABK70166.1 ABK72728.1 ABK72728.1 gabD2 gabD2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK73204.1Polyketide cyclase; Identified by match to protein family HMM PF04199. (262 aa)    
Predicted Functional Partners:
ABK74654.1
Conserved hypothetical protein; Identified by match to protein family HMM PF05853.
 
    0.846
ABK73221.1
Nicotine dehydrogenase; Identified by match to protein family HMM PF01315; match to protein family HMM PF02738.
  
  
 0.823
purU
Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).
      
 0.814
ABK72688.1
6-oxocamphor hydrolase; Identified by match to protein family HMM PF00378.
  
    0.777
ABK73456.1
Amine oxidase [flavin-containing] B; Identified by match to protein family HMM PF01266; match to protein family HMM PF01593.
  
  
 0.772
ABK70053.1
[2Fe-2S] binding domain protein; Identified by match to protein family HMM PF00111; match to protein family HMM PF01799.
  
    0.648
ABK71196.1
Carbon-monoxide dehydrogenase; Identified by match to protein family HMM PF01315; match to protein family HMM PF02738.
  
    0.647
ABK70166.1
Carbon monoxide dehydrogenase, medium chain; Identified by match to protein family HMM PF00941.
  
    0.647
ABK72728.1
Succinic semialdehyde dehydrogenase; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.
  
  
 0.601
gabD2
Succinic semialdehyde dehydrogenase; Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. Although it has succinate semialdehyde dehydrogenase activity, is likely to act physiologically on a different aldehyde(s) (By similarity).
  
  
 0.598
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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