Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70113.1 | ABK71102.1 | MSMEG_6860 | MSMEG_2955 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.763 |
ABK70113.1 | ABK74737.1 | MSMEG_6860 | MSMEG_1755 | Conserved hypothetical protein. | Anti-sigm factor, ChrR. | 0.630 |
ABK70113.1 | ABK76220.1 | MSMEG_6860 | MSMEG_2971 | Conserved hypothetical protein. | Regulatory protein. | 0.733 |
ABK70860.1 | ABK71102.1 | MSMEG_6714 | MSMEG_2955 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.431 |
ABK70860.1 | ABK75162.1 | MSMEG_6714 | MSMEG_2953 | Conserved hypothetical protein. | Ethyl tert-butyl ether degradation EthD; Identified by match to protein family HMM PF07110; match to protein family HMM TIGR02118. | 0.544 |
ABK71102.1 | ABK70113.1 | MSMEG_2955 | MSMEG_6860 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.763 |
ABK71102.1 | ABK70860.1 | MSMEG_2955 | MSMEG_6714 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.431 |
ABK71102.1 | ABK71769.1 | MSMEG_2955 | MSMEG_2970 | Conserved hypothetical protein. | Polysaccharide deacetylase; Identified by match to protein family HMM PF01522. | 0.486 |
ABK71102.1 | ABK73684.1 | MSMEG_2955 | MSMEG_2954 | Conserved hypothetical protein. | LacI-family protein transcriptional regulator; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532. | 0.515 |
ABK71102.1 | ABK74737.1 | MSMEG_2955 | MSMEG_1755 | Conserved hypothetical protein. | Anti-sigm factor, ChrR. | 0.711 |
ABK71102.1 | ABK75018.1 | MSMEG_2955 | MSMEG_2968 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.486 |
ABK71102.1 | ABK75162.1 | MSMEG_2955 | MSMEG_2953 | Conserved hypothetical protein. | Ethyl tert-butyl ether degradation EthD; Identified by match to protein family HMM PF07110; match to protein family HMM TIGR02118. | 0.590 |
ABK71102.1 | ABK76220.1 | MSMEG_2955 | MSMEG_2971 | Conserved hypothetical protein. | Regulatory protein. | 0.707 |
ABK71769.1 | ABK71102.1 | MSMEG_2970 | MSMEG_2955 | Polysaccharide deacetylase; Identified by match to protein family HMM PF01522. | Conserved hypothetical protein. | 0.486 |
ABK71769.1 | ABK74737.1 | MSMEG_2970 | MSMEG_1755 | Polysaccharide deacetylase; Identified by match to protein family HMM PF01522. | Anti-sigm factor, ChrR. | 0.501 |
ABK71769.1 | ABK75018.1 | MSMEG_2970 | MSMEG_2968 | Polysaccharide deacetylase; Identified by match to protein family HMM PF01522. | Conserved hypothetical protein. | 0.876 |
ABK71769.1 | ABK76220.1 | MSMEG_2970 | MSMEG_2971 | Polysaccharide deacetylase; Identified by match to protein family HMM PF01522. | Regulatory protein. | 0.623 |
ABK73684.1 | ABK71102.1 | MSMEG_2954 | MSMEG_2955 | LacI-family protein transcriptional regulator; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532. | Conserved hypothetical protein. | 0.515 |
ABK73684.1 | ABK75162.1 | MSMEG_2954 | MSMEG_2953 | LacI-family protein transcriptional regulator; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532. | Ethyl tert-butyl ether degradation EthD; Identified by match to protein family HMM PF07110; match to protein family HMM TIGR02118. | 0.721 |
ABK74737.1 | ABK70113.1 | MSMEG_1755 | MSMEG_6860 | Anti-sigm factor, ChrR. | Conserved hypothetical protein. | 0.630 |
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