STRINGSTRING
ABK71102.1 ABK71102.1 ABK70113.1 ABK70113.1 ABK74737.1 ABK74737.1 ABK76220.1 ABK76220.1 ABK75162.1 ABK75162.1 ABK73684.1 ABK73684.1 ABK75018.1 ABK75018.1 ABK71769.1 ABK71769.1 ABK70860.1 ABK70860.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71102.1Conserved hypothetical protein. (148 aa)    
Predicted Functional Partners:
ABK70113.1
Conserved hypothetical protein.
  
     0.763
ABK74737.1
Anti-sigm factor, ChrR.
 
     0.711
ABK76220.1
Regulatory protein.
 
    0.707
ABK75162.1
Ethyl tert-butyl ether degradation EthD; Identified by match to protein family HMM PF07110; match to protein family HMM TIGR02118.
 
    0.590
ABK73684.1
LacI-family protein transcriptional regulator; Identified by match to protein family HMM PF00356; match to protein family HMM PF00532.
  
    0.515
ABK75018.1
Conserved hypothetical protein.
  
    0.486
ABK71769.1
Polysaccharide deacetylase; Identified by match to protein family HMM PF01522.
  
    0.486
ABK70860.1
Conserved hypothetical protein.
 
    0.431
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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