STRINGSTRING
ABK72178.1 ABK72178.1 secF secF apt apt secD secD ABK71593.1 ABK71593.1 ABK70482.1 ABK70482.1 yajC yajC ABK71514.1 ABK71514.1 lpqB lpqB ABK72891.1 ABK72891.1 ABK70327.1 ABK70327.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
ABK72178.1Bacterial extracellular solute-binding protein, family protein 5; Identified by match to protein family HMM PF00496. (555 aa)    
Predicted Functional Partners:
secF
Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
  
  
 0.900
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
  
    0.897
secD
Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
  
    0.896
ABK71593.1
LprB protein.
 
  
 0.797
ABK70482.1
LprC protein.
 
  
 0.786
yajC
Preprotein translocase, YajC subunit; Identified by match to protein family HMM PF02699; match to protein family HMM TIGR00739.
  
    0.776
ABK71514.1
Secreted protein.
  
    0.757
lpqB
LpqB protein; May modulate activity of the MtrAB system in controlling homeostasis of the cell wall and cell division. Belongs to the LpqB lipoprotein family.
  
  
 0.718
ABK72891.1
Conserved hypothetical protein.
 
    0.716
ABK70327.1
Conserved hypothetical protein.
  
  
 0.707
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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