Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70468.1 | ABK70765.1 | MSMEG_2994 | MSMEG_0300 | Identified by match to protein family HMM PF04909. | Identified by match to protein family HMM PF04909. | 0.744 |
ABK70468.1 | ABK71768.1 | MSMEG_2994 | MSMEG_4802 | Identified by match to protein family HMM PF04909. | Conserved domain protein. | 0.750 |
ABK70468.1 | ABK72357.1 | MSMEG_2994 | MSMEG_4884 | Identified by match to protein family HMM PF04909. | Conserved hypothetical protein. | 0.768 |
ABK70468.1 | ABK72704.1 | MSMEG_2994 | MSMEG_4807 | Identified by match to protein family HMM PF04909. | Identified by match to protein family HMM PF04909. | 0.749 |
ABK70468.1 | ABK72974.1 | MSMEG_2994 | MSMEG_5629 | Identified by match to protein family HMM PF04909. | Conserved hypothetical protein. | 0.754 |
ABK70468.1 | ABK73531.1 | MSMEG_2994 | MSMEG_4815 | Identified by match to protein family HMM PF04909. | Conserved hypothetical protein. | 0.774 |
ABK70468.1 | ABK73594.1 | MSMEG_2994 | MSMEG_2992 | Identified by match to protein family HMM PF04909. | Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770. | 0.834 |
ABK70468.1 | ABK74049.1 | MSMEG_2994 | MSMEG_2995 | Identified by match to protein family HMM PF04909. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.945 |
ABK70468.1 | ABK74316.1 | MSMEG_2994 | MSMEG_4810 | Identified by match to protein family HMM PF04909. | Conserved hypothetical protein. | 0.768 |
ABK70468.1 | ABK75099.1 | MSMEG_2994 | MSMEG_2993 | Identified by match to protein family HMM PF04909. | acyl-CoA dehydrogenase, C- domain protein; Identified by match to protein family HMM PF00441; match to protein family HMM PF02771. | 0.808 |
ABK70765.1 | ABK70468.1 | MSMEG_0300 | MSMEG_2994 | Identified by match to protein family HMM PF04909. | Identified by match to protein family HMM PF04909. | 0.744 |
ABK70765.1 | ABK71768.1 | MSMEG_0300 | MSMEG_4802 | Identified by match to protein family HMM PF04909. | Conserved domain protein. | 0.490 |
ABK70765.1 | ABK72357.1 | MSMEG_0300 | MSMEG_4884 | Identified by match to protein family HMM PF04909. | Conserved hypothetical protein. | 0.435 |
ABK70765.1 | ABK72974.1 | MSMEG_0300 | MSMEG_5629 | Identified by match to protein family HMM PF04909. | Conserved hypothetical protein. | 0.745 |
ABK70765.1 | ABK73531.1 | MSMEG_0300 | MSMEG_4815 | Identified by match to protein family HMM PF04909. | Conserved hypothetical protein. | 0.740 |
ABK70765.1 | ABK73594.1 | MSMEG_0300 | MSMEG_2992 | Identified by match to protein family HMM PF04909. | Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770. | 0.460 |
ABK70765.1 | ABK74049.1 | MSMEG_0300 | MSMEG_2995 | Identified by match to protein family HMM PF04909. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.710 |
ABK70765.1 | ABK74316.1 | MSMEG_0300 | MSMEG_4810 | Identified by match to protein family HMM PF04909. | Conserved hypothetical protein. | 0.807 |
ABK71768.1 | ABK70468.1 | MSMEG_4802 | MSMEG_2994 | Conserved domain protein. | Identified by match to protein family HMM PF04909. | 0.750 |
ABK71768.1 | ABK70765.1 | MSMEG_4802 | MSMEG_0300 | Conserved domain protein. | Identified by match to protein family HMM PF04909. | 0.490 |
page 1 of 5