STRINGSTRING
ABK71335.1 ABK71335.1 ABK75574.1 ABK75574.1 ABK74369.1 ABK74369.1 ABK71173.1 ABK71173.1 ABK75826.1 ABK75826.1 ABK71701.1 ABK71701.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71335.1Conserved hypothetical protein. (248 aa)    
Predicted Functional Partners:
ABK75574.1
Conserved hypothetical protein; Identified by match to protein family HMM PF04944.
       0.636
ABK74369.1
Conserved hypothetical protein; Identified by match to protein family HMM PF01841.
  
    0.551
ABK71173.1
Transglutaminase domain protein; Identified by match to protein family HMM PF01841.
  
    0.549
ABK75826.1
Conserved hypothetical protein; Identified by match to protein family HMM PF04168; match to protein family HMM PF04169; match to protein family HMM PF04174.
  
    0.546
ABK71701.1
Conserved hypothetical protein.
  
    0.546
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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