Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69999.1 | ABK72548.1 | MSMEG_1130 | MSMEG_3024 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein; Identified by match to protein family HMM PF01894; match to protein family HMM TIGR00149. | 0.498 |
| ABK69999.1 | ABK72943.1 | MSMEG_1130 | MSMEG_5170 | Hypothetical protein; Identified by Glimmer2; putative. | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | 0.402 |
| ABK71489.1 | ABK72548.1 | MSMEG_3029 | MSMEG_3024 | Peptidase, A24 (type IV prepilin peptidase) family protein; Identified by match to protein family HMM PF01478. | Conserved hypothetical protein; Identified by match to protein family HMM PF01894; match to protein family HMM TIGR00149. | 0.573 |
| ABK71489.1 | ABK73002.1 | MSMEG_3029 | MSMEG_3026 | Peptidase, A24 (type IV prepilin peptidase) family protein; Identified by match to protein family HMM PF01478. | Conserved hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | 0.891 |
| ABK71489.1 | alaS | MSMEG_3029 | MSMEG_3025 | Peptidase, A24 (type IV prepilin peptidase) family protein; Identified by match to protein family HMM PF01478. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.891 |
| ABK71489.1 | aroB | MSMEG_3029 | MSMEG_3033 | Peptidase, A24 (type IV prepilin peptidase) family protein; Identified by match to protein family HMM PF01478. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.658 |
| ABK71489.1 | aroE | MSMEG_3029 | MSMEG_3028 | Peptidase, A24 (type IV prepilin peptidase) family protein; Identified by match to protein family HMM PF01478. | Shikimate-5-dehydrogenase; Identified by match to protein family HMM PF01488; match to protein family HMM TIGR01809; Belongs to the shikimate dehydrogenase family. | 0.932 |
| ABK71489.1 | mltG | MSMEG_3029 | MSMEG_3027 | Peptidase, A24 (type IV prepilin peptidase) family protein; Identified by match to protein family HMM PF01478. | Conserved hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.909 |
| ABK72548.1 | ABK69999.1 | MSMEG_3024 | MSMEG_1130 | Conserved hypothetical protein; Identified by match to protein family HMM PF01894; match to protein family HMM TIGR00149. | Hypothetical protein; Identified by Glimmer2; putative. | 0.498 |
| ABK72548.1 | ABK71489.1 | MSMEG_3024 | MSMEG_3029 | Conserved hypothetical protein; Identified by match to protein family HMM PF01894; match to protein family HMM TIGR00149. | Peptidase, A24 (type IV prepilin peptidase) family protein; Identified by match to protein family HMM PF01478. | 0.573 |
| ABK72548.1 | ABK72943.1 | MSMEG_3024 | MSMEG_5170 | Conserved hypothetical protein; Identified by match to protein family HMM PF01894; match to protein family HMM TIGR00149. | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | 0.435 |
| ABK72548.1 | ABK73002.1 | MSMEG_3024 | MSMEG_3026 | Conserved hypothetical protein; Identified by match to protein family HMM PF01894; match to protein family HMM TIGR00149. | Conserved hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | 0.744 |
| ABK72548.1 | ABK74386.1 | MSMEG_3024 | MSMEG_1414 | Conserved hypothetical protein; Identified by match to protein family HMM PF01894; match to protein family HMM TIGR00149. | Amidinotransferase; Identified by match to protein family HMM PF02274. | 0.406 |
| ABK72548.1 | alaS | MSMEG_3024 | MSMEG_3025 | Conserved hypothetical protein; Identified by match to protein family HMM PF01894; match to protein family HMM TIGR00149. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.781 |
| ABK72548.1 | aroB | MSMEG_3024 | MSMEG_3033 | Conserved hypothetical protein; Identified by match to protein family HMM PF01894; match to protein family HMM TIGR00149. | 3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ). | 0.437 |
| ABK72548.1 | aroE | MSMEG_3024 | MSMEG_3028 | Conserved hypothetical protein; Identified by match to protein family HMM PF01894; match to protein family HMM TIGR00149. | Shikimate-5-dehydrogenase; Identified by match to protein family HMM PF01488; match to protein family HMM TIGR01809; Belongs to the shikimate dehydrogenase family. | 0.741 |
| ABK72548.1 | mltG | MSMEG_3024 | MSMEG_3027 | Conserved hypothetical protein; Identified by match to protein family HMM PF01894; match to protein family HMM TIGR00149. | Conserved hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. | 0.744 |
| ABK72943.1 | ABK69999.1 | MSMEG_5170 | MSMEG_1130 | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | Hypothetical protein; Identified by Glimmer2; putative. | 0.402 |
| ABK72943.1 | ABK72548.1 | MSMEG_5170 | MSMEG_3024 | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | Conserved hypothetical protein; Identified by match to protein family HMM PF01894; match to protein family HMM TIGR00149. | 0.435 |
| ABK73002.1 | ABK71489.1 | MSMEG_3026 | MSMEG_3029 | Conserved hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family. | Peptidase, A24 (type IV prepilin peptidase) family protein; Identified by match to protein family HMM PF01478. | 0.891 |
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