Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69863.1 | ABK74181.1 | MSMEG_3493 | MSMEG_3032 | Putative secreted protein; Identified by match to protein family HMM PF05305. | Conserved hypothetical protein. | 0.445 |
| ABK74181.1 | ABK69863.1 | MSMEG_3032 | MSMEG_3493 | Conserved hypothetical protein. | Putative secreted protein; Identified by match to protein family HMM PF05305. | 0.445 |
| ABK74181.1 | ABK76054.1 | MSMEG_3032 | MSMEG_3034 | Conserved hypothetical protein. | Identified by match to protein family HMM PF00557. | 0.801 |
| ABK74181.1 | efp | MSMEG_3032 | MSMEG_3035 | Conserved hypothetical protein. | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.638 |
| ABK74181.1 | nusB | MSMEG_3032 | MSMEG_3036 | Conserved hypothetical protein. | Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.635 |
| ABK76054.1 | ABK74181.1 | MSMEG_3034 | MSMEG_3032 | Identified by match to protein family HMM PF00557. | Conserved hypothetical protein. | 0.801 |
| ABK76054.1 | efp | MSMEG_3034 | MSMEG_3035 | Identified by match to protein family HMM PF00557. | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.917 |
| ABK76054.1 | nusB | MSMEG_3034 | MSMEG_3036 | Identified by match to protein family HMM PF00557. | Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.866 |
| efp | ABK74181.1 | MSMEG_3035 | MSMEG_3032 | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | Conserved hypothetical protein. | 0.638 |
| efp | ABK76054.1 | MSMEG_3035 | MSMEG_3034 | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | Identified by match to protein family HMM PF00557. | 0.917 |
| efp | nusB | MSMEG_3035 | MSMEG_3036 | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.947 |
| nusB | ABK74181.1 | MSMEG_3036 | MSMEG_3032 | Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | Conserved hypothetical protein. | 0.635 |
| nusB | ABK76054.1 | MSMEG_3036 | MSMEG_3034 | Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | Identified by match to protein family HMM PF00557. | 0.866 |
| nusB | efp | MSMEG_3036 | MSMEG_3035 | Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.947 |