Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK72801.1 | ABK74534.1 | MSMEG_3471 | MSMEG_2787 | GTP cyclohydrolase. | Putative riboflavin biosynthesis protein RibD; Identified by match to protein family HMM PF01872. | 0.550 |
| ABK72801.1 | ribD | MSMEG_3471 | MSMEG_3067 | GTP cyclohydrolase. | Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.857 |
| ABK72801.1 | ribE | MSMEG_3471 | MSMEG_3071 | GTP cyclohydrolase. | Riboflavin synthase, alpha subunit; Identified by match to protein family HMM PF00677; match to protein family HMM TIGR00187. | 0.816 |
| ABK72801.1 | ribE-2 | MSMEG_3471 | MSMEG_3073 | GTP cyclohydrolase. | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | 0.733 |
| ABK72801.1 | ribH | MSMEG_3471 | MSMEG_6598 | GTP cyclohydrolase. | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | 0.692 |
| ABK73093.1 | ABK73277.1 | MSMEG_3069 | MSMEG_3075 | Aminoglycosides/tetracycline-transport integral membrane protein; In association with lipoprotein LprG probably transports triacyglycerides (TAG) across the inner cell membrane into the periplasm; TAG probably regulates lipid metabolism and growth regulation (By similarity). Confers resistance to ethidium bromide, possibly acting as an efflux pump, requires LprG lipoprotein for normal function. Export of ethidium bromide can be complemented by the equivalent operon from M.tuberculosis (lprG- Rv1410c) ; Belongs to the major facilitator superfamily. | Identified by similarity to GB:AAK38651.1; match to protein family HMM PF00583. | 0.820 |
| ABK73093.1 | ABK75968.1 | MSMEG_3069 | MSMEG_3068 | Aminoglycosides/tetracycline-transport integral membrane protein; In association with lipoprotein LprG probably transports triacyglycerides (TAG) across the inner cell membrane into the periplasm; TAG probably regulates lipid metabolism and growth regulation (By similarity). Confers resistance to ethidium bromide, possibly acting as an efflux pump, requires LprG lipoprotein for normal function. Export of ethidium bromide can be complemented by the equivalent operon from M.tuberculosis (lprG- Rv1410c) ; Belongs to the major facilitator superfamily. | Hypothetical protein; Identified by Glimmer2; putative. | 0.815 |
| ABK73093.1 | ribBA | MSMEG_3069 | MSMEG_3072 | Aminoglycosides/tetracycline-transport integral membrane protein; In association with lipoprotein LprG probably transports triacyglycerides (TAG) across the inner cell membrane into the periplasm; TAG probably regulates lipid metabolism and growth regulation (By similarity). Confers resistance to ethidium bromide, possibly acting as an efflux pump, requires LprG lipoprotein for normal function. Export of ethidium bromide can be complemented by the equivalent operon from M.tuberculosis (lprG- Rv1410c) ; Belongs to the major facilitator superfamily. | Riboflavin biosynthesis protein ribAB; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.484 |
| ABK73093.1 | ribE | MSMEG_3069 | MSMEG_3071 | Aminoglycosides/tetracycline-transport integral membrane protein; In association with lipoprotein LprG probably transports triacyglycerides (TAG) across the inner cell membrane into the periplasm; TAG probably regulates lipid metabolism and growth regulation (By similarity). Confers resistance to ethidium bromide, possibly acting as an efflux pump, requires LprG lipoprotein for normal function. Export of ethidium bromide can be complemented by the equivalent operon from M.tuberculosis (lprG- Rv1410c) ; Belongs to the major facilitator superfamily. | Riboflavin synthase, alpha subunit; Identified by match to protein family HMM PF00677; match to protein family HMM TIGR00187. | 0.962 |
| ABK73093.1 | ribE-2 | MSMEG_3069 | MSMEG_3073 | Aminoglycosides/tetracycline-transport integral membrane protein; In association with lipoprotein LprG probably transports triacyglycerides (TAG) across the inner cell membrane into the periplasm; TAG probably regulates lipid metabolism and growth regulation (By similarity). Confers resistance to ethidium bromide, possibly acting as an efflux pump, requires LprG lipoprotein for normal function. Export of ethidium bromide can be complemented by the equivalent operon from M.tuberculosis (lprG- Rv1410c) ; Belongs to the major facilitator superfamily. | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | 0.586 |
| ABK73277.1 | ABK73093.1 | MSMEG_3075 | MSMEG_3069 | Identified by similarity to GB:AAK38651.1; match to protein family HMM PF00583. | Aminoglycosides/tetracycline-transport integral membrane protein; In association with lipoprotein LprG probably transports triacyglycerides (TAG) across the inner cell membrane into the periplasm; TAG probably regulates lipid metabolism and growth regulation (By similarity). Confers resistance to ethidium bromide, possibly acting as an efflux pump, requires LprG lipoprotein for normal function. Export of ethidium bromide can be complemented by the equivalent operon from M.tuberculosis (lprG- Rv1410c) ; Belongs to the major facilitator superfamily. | 0.820 |
| ABK73277.1 | ABK75968.1 | MSMEG_3075 | MSMEG_3068 | Identified by similarity to GB:AAK38651.1; match to protein family HMM PF00583. | Hypothetical protein; Identified by Glimmer2; putative. | 0.816 |
| ABK73277.1 | ribE | MSMEG_3075 | MSMEG_3071 | Identified by similarity to GB:AAK38651.1; match to protein family HMM PF00583. | Riboflavin synthase, alpha subunit; Identified by match to protein family HMM PF00677; match to protein family HMM TIGR00187. | 0.828 |
| ABK74534.1 | ABK72801.1 | MSMEG_2787 | MSMEG_3471 | Putative riboflavin biosynthesis protein RibD; Identified by match to protein family HMM PF01872. | GTP cyclohydrolase. | 0.550 |
| ABK74534.1 | ribBA | MSMEG_2787 | MSMEG_3072 | Putative riboflavin biosynthesis protein RibD; Identified by match to protein family HMM PF01872. | Riboflavin biosynthesis protein ribAB; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.924 |
| ABK74534.1 | ribE | MSMEG_2787 | MSMEG_3071 | Putative riboflavin biosynthesis protein RibD; Identified by match to protein family HMM PF01872. | Riboflavin synthase, alpha subunit; Identified by match to protein family HMM PF00677; match to protein family HMM TIGR00187. | 0.789 |
| ABK74534.1 | ribE-2 | MSMEG_2787 | MSMEG_3073 | Putative riboflavin biosynthesis protein RibD; Identified by match to protein family HMM PF01872. | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | 0.874 |
| ABK74534.1 | ribF | MSMEG_2787 | MSMEG_2653 | Putative riboflavin biosynthesis protein RibD; Identified by match to protein family HMM PF01872. | Riboflavin biosynthesis protein RibF; Identified by match to protein family HMM PF01687; match to protein family HMM PF06574; match to protein family HMM TIGR00083; match to protein family HMM TIGR00125; Belongs to the ribF family. | 0.818 |
| ABK74534.1 | ribH | MSMEG_2787 | MSMEG_6598 | Putative riboflavin biosynthesis protein RibD; Identified by match to protein family HMM PF01872. | 6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin. | 0.680 |
| ABK75968.1 | ABK73093.1 | MSMEG_3068 | MSMEG_3069 | Hypothetical protein; Identified by Glimmer2; putative. | Aminoglycosides/tetracycline-transport integral membrane protein; In association with lipoprotein LprG probably transports triacyglycerides (TAG) across the inner cell membrane into the periplasm; TAG probably regulates lipid metabolism and growth regulation (By similarity). Confers resistance to ethidium bromide, possibly acting as an efflux pump, requires LprG lipoprotein for normal function. Export of ethidium bromide can be complemented by the equivalent operon from M.tuberculosis (lprG- Rv1410c) ; Belongs to the major facilitator superfamily. | 0.815 |
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