STRINGSTRING
ABK76206.1 ABK76206.1 ABK75738.1 ABK75738.1 ABK69818.1 ABK69818.1 ABK70342.1 ABK70342.1 mce mce ABK73547.1 ABK73547.1 whiA whiA ABK72851.1 ABK72851.1 ABK72905.1 ABK72905.1 tpiA tpiA gap gap
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK76206.1Soul heme-binding protein. (130 aa)    
Predicted Functional Partners:
ABK75738.1
Nucleoside-diphosphate sugar epimerase; Identified by match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01777.
  
    0.826
ABK69818.1
Conserved hypothetical protein.
   
  
 0.817
ABK70342.1
IS1096, tnpA protein; Identified by similarity to GP:150005; match to protein family HMM PF01610.
      
 0.815
mce
methylmalonyl-CoA epimerase; Identified by match to protein family HMM PF00903; match to protein family HMM TIGR03081.
      
 0.689
ABK73547.1
IS1096, tnpA protein; Identified by similarity to GP:150005; match to protein family HMM PF01610.
      
 0.585
whiA
Conserved hypothetical protein; Involved in cell division and chromosome segregation.
  
    0.550
ABK72851.1
Conserved hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.
  
    0.548
ABK72905.1
Conserved hypothetical protein; Displays ATPase and GTPase activities.
  
    0.546
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
    0.529
gap
Glyceraldehyde-3-phosphate dehydrogenase, type I; Catalyzes the oxidative phosphorylation of glyceraldehyde 3- phosphate (G3P) to 1,3-bisphosphoglycerate (BPG) using the cofactor NAD. The first reaction step involves the formation of a hemiacetal intermediate between G3P and a cysteine residue, and this hemiacetal intermediate is then oxidized to a thioester, with concomitant reduction of NAD to NADH. The reduced NADH is then exchanged with the second NAD, and the thioester is attacked by a nucleophilic inorganic phosphate to produce BPG.
  
    0.528
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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