STRINGSTRING
ABK75738.1 ABK75738.1 ABK76206.1 ABK76206.1 ABK72851.1 ABK72851.1 ABK72905.1 ABK72905.1 tpiA tpiA whiA whiA pgk pgk gap gap hemH hemH ABK69816.1 ABK69816.1 ABK74272.1 ABK74272.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
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Experiments
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[Homology]
Score
ABK75738.1Nucleoside-diphosphate sugar epimerase; Identified by match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01777. (448 aa)    
Predicted Functional Partners:
ABK76206.1
Soul heme-binding protein.
  
    0.826
ABK72851.1
Conserved hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.
  
    0.597
ABK72905.1
Conserved hypothetical protein; Displays ATPase and GTPase activities.
  
    0.571
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
  
 0.564
whiA
Conserved hypothetical protein; Involved in cell division and chromosome segregation.
  
    0.546
pgk
Phosphoglycerate kinase; Identified by match to protein family HMM PF00162; Belongs to the phosphoglycerate kinase family.
  
    0.542
gap
Glyceraldehyde-3-phosphate dehydrogenase, type I; Catalyzes the oxidative phosphorylation of glyceraldehyde 3- phosphate (G3P) to 1,3-bisphosphoglycerate (BPG) using the cofactor NAD. The first reaction step involves the formation of a hemiacetal intermediate between G3P and a cysteine residue, and this hemiacetal intermediate is then oxidized to a thioester, with concomitant reduction of NAD to NADH. The reduced NADH is then exchanged with the second NAD, and the thioester is attacked by a nucleophilic inorganic phosphate to produce BPG.
  
    0.538
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
  
  
 0.536
ABK69816.1
Nucleoside-diphosphate-sugar epimerase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF05368.
    0.529
ABK74272.1
3-demethylubiquinone-9 3-methyltransferase; Identified by match to protein family HMM PF06983.
  
    0.508
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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