STRINGSTRING
ABK72929.1 ABK72929.1 ABK73018.1 ABK73018.1 ABK74166.1 ABK74166.1 sufC sufC sufB sufB sufD sufD ABK72979.1 ABK72979.1 ABK70509.1 ABK70509.1 ABK74617.1 ABK74617.1 ABK73947.1 ABK73947.1 ABK72041.1 ABK72041.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
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Coexpression
Experiments
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[Homology]
Score
ABK72929.1Conserved protein, DUF59; Identified by match to protein family HMM PF01883. (113 aa)    
Predicted Functional Partners:
ABK73018.1
SUF system FeS assembly protein, NifU family protein; Identified by match to protein family HMM PF01592; match to protein family HMM TIGR01994.
 
    0.994
ABK74166.1
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
  
 0.986
sufC
FeS assembly ATPase SufC; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01978.
 
  
 0.982
sufB
FeS assembly protein SufB; Identified by match to protein family HMM PF01458; match to protein family HMM TIGR01980.
 
  
 0.979
sufD
FeS assembly protein SufD; Identified by match to protein family HMM PF01458; match to protein family HMM TIGR01981.
 
  
 0.974
ABK72979.1
Identified by match to protein family HMM PF01022.
  
    0.896
ABK70509.1
ABC transporter efflux protein, DrrB family protein; Identified by match to protein family HMM PF01061; match to protein family HMM TIGR00025.
  
    0.796
ABK74617.1
Cysteine desulphurase, SufS; Identified by match to protein family HMM PF00266; match to protein family HMM PF01212; match to protein family HMM TIGR01979; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
 
  
 0.777
ABK73947.1
Conserved hypothetical protein; Catalyzes the addition of alpha-(1->6)-mannose residue.
  
    0.758
ABK72041.1
Cytochrome aa3 controlling protein; Identified by match to protein family HMM PF02628.
  
    0.686
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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