STRINGSTRING
ABK72742.1 ABK72742.1 ABK70103.1 ABK70103.1 ABK71363.1 ABK71363.1 ABK73084.1 ABK73084.1 ABK70416.1 ABK70416.1 ABK70291.1 ABK70291.1 ABK73186.1 ABK73186.1 gmk gmk ppm1 ppm1 ABK75029.1 ABK75029.1 ABK75593.1 ABK75593.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72742.1Identified by match to protein family HMM PF00501. (544 aa)    
Predicted Functional Partners:
ABK70103.1
Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801.
  
 0.955
ABK71363.1
acyl-CoA synthase; Identified by match to protein family HMM PF00501.
 
 
0.937
ABK73084.1
AMP-binding enzyme; Identified by match to protein family HMM PF00501.
  
  
 
0.921
ABK70416.1
DNA-binding protein.
  
  
 0.838
ABK70291.1
enoyl-CoA hydratase/isomerase; Identified by match to protein family HMM PF00378.
  
 
 0.685
ABK73186.1
AMP-binding enzyme; Identified by match to protein family HMM PF00501.
 
  
 0.659
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
   
  0.654
ppm1
Glycosyl transferase, group 2 family protein; Transfers mannose from GDP-mannose to lipid acceptors to form polyprenol monophosphomannose (PPM); catalytic activity in vitro is enhanced by Lnt (AC A0QZ13). PMM is an alkai-stable sugar donor which adds mannose-phosphate residues to triacylated-PIM2, eventually leading to generation of the cell wall glycolipid lipoglycan modulins lipoarabinomannan (LAM) and lipomannan (LM) (By similarity).
  
  
 0.610
ABK75029.1
Medium chain acyl-CoA synthetase; Identified by match to protein family HMM PF00501.
 
  
 0.591
ABK75593.1
Medium chain acyl-CoA synthetase; Identified by match to protein family HMM PF00501.
 
  
 0.580
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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