Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70103.1 | ABK70291.1 | MSMEG_4757 | MSMEG_4299 | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | enoyl-CoA hydratase/isomerase; Identified by match to protein family HMM PF00378. | 0.747 |
ABK70103.1 | ABK71363.1 | MSMEG_4757 | MSMEG_0257 | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | acyl-CoA synthase; Identified by match to protein family HMM PF00501. | 0.925 |
ABK70103.1 | ABK72742.1 | MSMEG_4757 | MSMEG_3131 | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | Identified by match to protein family HMM PF00501. | 0.955 |
ABK70103.1 | ABK73084.1 | MSMEG_4757 | MSMEG_4254 | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | AMP-binding enzyme; Identified by match to protein family HMM PF00501. | 0.955 |
ABK70291.1 | ABK70103.1 | MSMEG_4299 | MSMEG_4757 | enoyl-CoA hydratase/isomerase; Identified by match to protein family HMM PF00378. | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | 0.747 |
ABK70291.1 | ABK70416.1 | MSMEG_4299 | MSMEG_3132 | enoyl-CoA hydratase/isomerase; Identified by match to protein family HMM PF00378. | DNA-binding protein. | 0.818 |
ABK70291.1 | ABK72742.1 | MSMEG_4299 | MSMEG_3131 | enoyl-CoA hydratase/isomerase; Identified by match to protein family HMM PF00378. | Identified by match to protein family HMM PF00501. | 0.685 |
ABK70416.1 | ABK70291.1 | MSMEG_3132 | MSMEG_4299 | DNA-binding protein. | enoyl-CoA hydratase/isomerase; Identified by match to protein family HMM PF00378. | 0.818 |
ABK70416.1 | ABK72742.1 | MSMEG_3132 | MSMEG_3131 | DNA-binding protein. | Identified by match to protein family HMM PF00501. | 0.838 |
ABK71363.1 | ABK70103.1 | MSMEG_0257 | MSMEG_4757 | acyl-CoA synthase; Identified by match to protein family HMM PF00501. | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | 0.925 |
ABK71363.1 | ABK72742.1 | MSMEG_0257 | MSMEG_3131 | acyl-CoA synthase; Identified by match to protein family HMM PF00501. | Identified by match to protein family HMM PF00501. | 0.937 |
ABK71363.1 | ABK73084.1 | MSMEG_0257 | MSMEG_4254 | acyl-CoA synthase; Identified by match to protein family HMM PF00501. | AMP-binding enzyme; Identified by match to protein family HMM PF00501. | 0.929 |
ABK72742.1 | ABK70103.1 | MSMEG_3131 | MSMEG_4757 | Identified by match to protein family HMM PF00501. | Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801. | 0.955 |
ABK72742.1 | ABK70291.1 | MSMEG_3131 | MSMEG_4299 | Identified by match to protein family HMM PF00501. | enoyl-CoA hydratase/isomerase; Identified by match to protein family HMM PF00378. | 0.685 |
ABK72742.1 | ABK70416.1 | MSMEG_3131 | MSMEG_3132 | Identified by match to protein family HMM PF00501. | DNA-binding protein. | 0.838 |
ABK72742.1 | ABK71363.1 | MSMEG_3131 | MSMEG_0257 | Identified by match to protein family HMM PF00501. | acyl-CoA synthase; Identified by match to protein family HMM PF00501. | 0.937 |
ABK72742.1 | ABK73084.1 | MSMEG_3131 | MSMEG_4254 | Identified by match to protein family HMM PF00501. | AMP-binding enzyme; Identified by match to protein family HMM PF00501. | 0.921 |
ABK72742.1 | ABK73186.1 | MSMEG_3131 | MSMEG_2231 | Identified by match to protein family HMM PF00501. | AMP-binding enzyme; Identified by match to protein family HMM PF00501. | 0.659 |
ABK72742.1 | ABK75029.1 | MSMEG_3131 | MSMEG_3687 | Identified by match to protein family HMM PF00501. | Medium chain acyl-CoA synthetase; Identified by match to protein family HMM PF00501. | 0.591 |
ABK72742.1 | ABK75593.1 | MSMEG_3131 | MSMEG_2241 | Identified by match to protein family HMM PF00501. | Medium chain acyl-CoA synthetase; Identified by match to protein family HMM PF00501. | 0.580 |
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