Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70291.1 | ABK70416.1 | MSMEG_4299 | MSMEG_3132 | enoyl-CoA hydratase/isomerase; Identified by match to protein family HMM PF00378. | DNA-binding protein. | 0.818 |
ABK70291.1 | ABK70485.1 | MSMEG_4299 | MSMEG_0566 | enoyl-CoA hydratase/isomerase; Identified by match to protein family HMM PF00378. | Aliphatic amidase; Identified by match to protein family HMM PF00795. | 0.427 |
ABK70291.1 | ABK72742.1 | MSMEG_4299 | MSMEG_3131 | enoyl-CoA hydratase/isomerase; Identified by match to protein family HMM PF00378. | Identified by match to protein family HMM PF00501. | 0.685 |
ABK70291.1 | ABK72858.1 | MSMEG_4299 | MSMEG_3297 | enoyl-CoA hydratase/isomerase; Identified by match to protein family HMM PF00378. | Transcriptional regulator, CadC; Identified by match to protein family HMM PF00486; match to protein family HMM PF00561. | 0.498 |
ABK70291.1 | ABK73152.1 | MSMEG_4299 | MSMEG_0436 | enoyl-CoA hydratase/isomerase; Identified by match to protein family HMM PF00378. | Allophanate hydrolase subunit 1; Identified by match to protein family HMM PF02682. | 0.434 |
ABK70291.1 | ABK74677.1 | MSMEG_4299 | MSMEG_1085 | enoyl-CoA hydratase/isomerase; Identified by match to protein family HMM PF00378. | Dipeptide transport system permease protein DppB; Identified by match to protein family HMM PF00528. | 0.478 |
ABK70291.1 | ABK75274.1 | MSMEG_4299 | MSMEG_3555 | enoyl-CoA hydratase/isomerase; Identified by match to protein family HMM PF00378. | Hydrolase; Identified by match to protein family HMM PF00795. | 0.567 |
ABK70291.1 | ABK75339.1 | MSMEG_4299 | MSMEG_0435 | enoyl-CoA hydratase/isomerase; Identified by match to protein family HMM PF00378. | Allophanate hydrolase subunit 2; Identified by match to protein family HMM PF02626; match to protein family HMM TIGR00724. | 0.435 |
ABK70291.1 | ABK76140.1 | MSMEG_4299 | MSMEG_1296 | enoyl-CoA hydratase/isomerase; Identified by match to protein family HMM PF00378. | Uricase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin. | 0.478 |
ABK70416.1 | ABK70291.1 | MSMEG_3132 | MSMEG_4299 | DNA-binding protein. | enoyl-CoA hydratase/isomerase; Identified by match to protein family HMM PF00378. | 0.818 |
ABK70416.1 | ABK70485.1 | MSMEG_3132 | MSMEG_0566 | DNA-binding protein. | Aliphatic amidase; Identified by match to protein family HMM PF00795. | 0.445 |
ABK70416.1 | ABK71655.1 | MSMEG_3132 | MSMEG_3134 | DNA-binding protein. | Cytochrome P450 107B1; Identified by match to protein family HMM PF00067; Belongs to the cytochrome P450 family. | 0.515 |
ABK70416.1 | ABK72742.1 | MSMEG_3132 | MSMEG_3131 | DNA-binding protein. | Identified by match to protein family HMM PF00501. | 0.838 |
ABK70416.1 | ABK72858.1 | MSMEG_3132 | MSMEG_3297 | DNA-binding protein. | Transcriptional regulator, CadC; Identified by match to protein family HMM PF00486; match to protein family HMM PF00561. | 0.528 |
ABK70416.1 | ABK73152.1 | MSMEG_3132 | MSMEG_0436 | DNA-binding protein. | Allophanate hydrolase subunit 1; Identified by match to protein family HMM PF02682. | 0.546 |
ABK70416.1 | ABK74677.1 | MSMEG_3132 | MSMEG_1085 | DNA-binding protein. | Dipeptide transport system permease protein DppB; Identified by match to protein family HMM PF00528. | 0.533 |
ABK70416.1 | ABK75274.1 | MSMEG_3132 | MSMEG_3555 | DNA-binding protein. | Hydrolase; Identified by match to protein family HMM PF00795. | 0.524 |
ABK70416.1 | ABK75339.1 | MSMEG_3132 | MSMEG_0435 | DNA-binding protein. | Allophanate hydrolase subunit 2; Identified by match to protein family HMM PF02626; match to protein family HMM TIGR00724. | 0.546 |
ABK70416.1 | ABK76140.1 | MSMEG_3132 | MSMEG_1296 | DNA-binding protein. | Uricase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin. | 0.524 |
ABK70485.1 | ABK70291.1 | MSMEG_0566 | MSMEG_4299 | Aliphatic amidase; Identified by match to protein family HMM PF00795. | enoyl-CoA hydratase/isomerase; Identified by match to protein family HMM PF00378. | 0.427 |
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