STRINGSTRING
ABK71832.1 ABK71832.1 ripA ripA ABK74821.1 ABK74821.1 ABK70830.1 ABK70830.1 moxR moxR ABK75913.1 ABK75913.1 ABK72529.1 ABK72529.1 ABK72323.1 ABK72323.1 ABK70345.1 ABK70345.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71832.1Invasin 1; Identified by match to protein family HMM PF00877. (229 aa)    
Predicted Functional Partners:
ripA
Secreted cell wall-associated hydrolase; Peptidoglycan endopeptidase that cleaves the bond between D- glutamate and meso-diaminopimelate. Binds and degrades high-molecular weight peptidoglycan. Required for normal separation of daughter cells after cell division and for cell wall integrity (By similarity).
 
   
0.731
ABK74821.1
Putative cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
  
 0.549
ABK70830.1
Possible inv protein; Identified by match to protein family HMM PF00877.
  
  
0.469
moxR
Identified by match to protein family HMM PF07726; match to protein family HMM PF07728.
  
  
 0.454
ABK75913.1
Putative membrane protein.
  
    0.442
ABK72529.1
Conserved hypothetical protein.
  
    0.441
ABK72323.1
N-acetylmuramoyl-L-alanine amidase; Identified by match to protein family HMM PF01471; match to protein family HMM PF01520.
 
  
 0.428
ABK70345.1
Conserved hypothetical protein; Identified by match to protein family HMM PF00092.
  
  
 0.404
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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