Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70345.1 | ABK70497.1 | MSMEG_3149 | MSMEG_6328 | Conserved hypothetical protein; Identified by match to protein family HMM PF00092. | Conserved hypothetical protein. | 0.592 |
ABK70345.1 | ABK72276.1 | MSMEG_3149 | MSMEG_2615 | Conserved hypothetical protein; Identified by match to protein family HMM PF00092. | Chelatase; Identified by match to protein family HMM PF00092; match to protein family HMM PF01078; match to protein family HMM PF07728. | 0.727 |
ABK70345.1 | ABK72529.1 | MSMEG_3149 | MSMEG_3148 | Conserved hypothetical protein; Identified by match to protein family HMM PF00092. | Conserved hypothetical protein. | 0.985 |
ABK70345.1 | ABK73214.1 | MSMEG_3149 | MSMEG_3867 | Conserved hypothetical protein; Identified by match to protein family HMM PF00092. | ATPase family protein associated with various cellular activities (AAA); Identified by match to protein family HMM PF01882; match to protein family HMM PF07726; match to protein family HMM PF07728. | 0.613 |
ABK70345.1 | ABK73730.1 | MSMEG_3149 | MSMEG_5512 | Conserved hypothetical protein; Identified by match to protein family HMM PF00092. | Magnesium chelatase. | 0.761 |
ABK70345.1 | ABK73781.1 | MSMEG_3149 | MSMEG_2363 | Conserved hypothetical protein; Identified by match to protein family HMM PF00092. | Amino acid-binding ACT; Identified by match to protein family HMM PF01842. | 0.643 |
ABK70345.1 | ABK74689.1 | MSMEG_3149 | MSMEG_6610 | Conserved hypothetical protein; Identified by match to protein family HMM PF00092. | Protein of unknown function DUF58, putative. | 0.833 |
ABK70345.1 | hemH | MSMEG_3149 | MSMEG_3152 | Conserved hypothetical protein; Identified by match to protein family HMM PF00092. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.612 |
ABK70345.1 | moxR | MSMEG_3149 | MSMEG_3147 | Conserved hypothetical protein; Identified by match to protein family HMM PF00092. | Identified by match to protein family HMM PF07726; match to protein family HMM PF07728. | 0.968 |
ABK70345.1 | moxR-2 | MSMEG_3149 | MSMEG_6612 | Conserved hypothetical protein; Identified by match to protein family HMM PF00092. | Identified by match to protein family HMM PF07726; match to protein family HMM PF07728. | 0.635 |
ABK70497.1 | ABK70345.1 | MSMEG_6328 | MSMEG_3149 | Conserved hypothetical protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF00092. | 0.592 |
ABK70497.1 | ABK72529.1 | MSMEG_6328 | MSMEG_3148 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.401 |
ABK70497.1 | ABK73781.1 | MSMEG_6328 | MSMEG_2363 | Conserved hypothetical protein. | Amino acid-binding ACT; Identified by match to protein family HMM PF01842. | 0.769 |
ABK72276.1 | ABK70345.1 | MSMEG_2615 | MSMEG_3149 | Chelatase; Identified by match to protein family HMM PF00092; match to protein family HMM PF01078; match to protein family HMM PF07728. | Conserved hypothetical protein; Identified by match to protein family HMM PF00092. | 0.727 |
ABK72276.1 | ABK73214.1 | MSMEG_2615 | MSMEG_3867 | Chelatase; Identified by match to protein family HMM PF00092; match to protein family HMM PF01078; match to protein family HMM PF07728. | ATPase family protein associated with various cellular activities (AAA); Identified by match to protein family HMM PF01882; match to protein family HMM PF07726; match to protein family HMM PF07728. | 0.433 |
ABK72276.1 | ABK73730.1 | MSMEG_2615 | MSMEG_5512 | Chelatase; Identified by match to protein family HMM PF00092; match to protein family HMM PF01078; match to protein family HMM PF07728. | Magnesium chelatase. | 0.971 |
ABK72276.1 | hemH | MSMEG_2615 | MSMEG_3152 | Chelatase; Identified by match to protein family HMM PF00092; match to protein family HMM PF01078; match to protein family HMM PF07728. | Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family. | 0.946 |
ABK72529.1 | ABK70345.1 | MSMEG_3148 | MSMEG_3149 | Conserved hypothetical protein. | Conserved hypothetical protein; Identified by match to protein family HMM PF00092. | 0.985 |
ABK72529.1 | ABK70497.1 | MSMEG_3148 | MSMEG_6328 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.401 |
ABK72529.1 | ABK73214.1 | MSMEG_3148 | MSMEG_3867 | Conserved hypothetical protein. | ATPase family protein associated with various cellular activities (AAA); Identified by match to protein family HMM PF01882; match to protein family HMM PF07726; match to protein family HMM PF07728. | 0.760 |
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