Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70275.1 | ABK71936.1 | MSMEG_3155 | MSMEG_3154 | Band 7 protein; Identified by match to protein family HMM PF01145. | Membrane protein implicated in regulation of membrane protease activity; Identified by match to protein family HMM PF01957. | 0.941 |
| ABK70275.1 | ABK72764.1 | MSMEG_3155 | MSMEG_1517 | Band 7 protein; Identified by match to protein family HMM PF01145. | Spfh domain/band 7 family protein, putative; Identified by match to protein family HMM PF01145. | 0.756 |
| ABK70275.1 | ABK72868.1 | MSMEG_3155 | MSMEG_3153 | Band 7 protein; Identified by match to protein family HMM PF01145. | Conserved hypothetical protein. | 0.534 |
| ABK70275.1 | ABK75335.1 | MSMEG_3155 | MSMEG_3156 | Band 7 protein; Identified by match to protein family HMM PF01145. | Conserved hypothetical protein. | 0.708 |
| ABK71936.1 | ABK70275.1 | MSMEG_3154 | MSMEG_3155 | Membrane protein implicated in regulation of membrane protease activity; Identified by match to protein family HMM PF01957. | Band 7 protein; Identified by match to protein family HMM PF01145. | 0.941 |
| ABK71936.1 | ABK72513.1 | MSMEG_3154 | MSMEG_3873 | Membrane protein implicated in regulation of membrane protease activity; Identified by match to protein family HMM PF01957. | Cobalamin biosynthesis protein cobIJ; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01466; match to protein family HMM TIGR01467; Belongs to the precorrin methyltransferase family. | 0.714 |
| ABK71936.1 | ABK72764.1 | MSMEG_3154 | MSMEG_1517 | Membrane protein implicated in regulation of membrane protease activity; Identified by match to protein family HMM PF01957. | Spfh domain/band 7 family protein, putative; Identified by match to protein family HMM PF01145. | 0.685 |
| ABK71936.1 | ABK72868.1 | MSMEG_3154 | MSMEG_3153 | Membrane protein implicated in regulation of membrane protease activity; Identified by match to protein family HMM PF01957. | Conserved hypothetical protein. | 0.944 |
| ABK71936.1 | ABK74394.1 | MSMEG_3154 | MSMEG_4576 | Membrane protein implicated in regulation of membrane protease activity; Identified by match to protein family HMM PF01957. | SpfH domain protein; Identified by match to protein family HMM PF01145. | 0.571 |
| ABK71936.1 | ABK74899.1 | MSMEG_3154 | MSMEG_5697 | Membrane protein implicated in regulation of membrane protease activity; Identified by match to protein family HMM PF01957. | Integral membrane protein; Identified by match to protein family HMM PF03733. | 0.615 |
| ABK71936.1 | ABK75335.1 | MSMEG_3154 | MSMEG_3156 | Membrane protein implicated in regulation of membrane protease activity; Identified by match to protein family HMM PF01957. | Conserved hypothetical protein. | 0.595 |
| ABK71936.1 | cobM | MSMEG_3154 | MSMEG_3877 | Membrane protein implicated in regulation of membrane protease activity; Identified by match to protein family HMM PF01957. | Precorrin-4 C11-methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01465; Belongs to the precorrin methyltransferase family. | 0.523 |
| ABK71936.1 | cobS | MSMEG_3154 | MSMEG_4277 | Membrane protein implicated in regulation of membrane protease activity; Identified by match to protein family HMM PF01957. | Cobalamin 5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.705 |
| ABK71936.1 | ripA | MSMEG_3154 | MSMEG_3145 | Membrane protein implicated in regulation of membrane protease activity; Identified by match to protein family HMM PF01957. | Secreted cell wall-associated hydrolase; Peptidoglycan endopeptidase that cleaves the bond between D- glutamate and meso-diaminopimelate. Binds and degrades high-molecular weight peptidoglycan. Required for normal separation of daughter cells after cell division and for cell wall integrity (By similarity). | 0.610 |
| ABK72513.1 | ABK71936.1 | MSMEG_3873 | MSMEG_3154 | Cobalamin biosynthesis protein cobIJ; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01466; match to protein family HMM TIGR01467; Belongs to the precorrin methyltransferase family. | Membrane protein implicated in regulation of membrane protease activity; Identified by match to protein family HMM PF01957. | 0.714 |
| ABK72513.1 | cobM | MSMEG_3873 | MSMEG_3877 | Cobalamin biosynthesis protein cobIJ; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01466; match to protein family HMM TIGR01467; Belongs to the precorrin methyltransferase family. | Precorrin-4 C11-methyltransferase; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01465; Belongs to the precorrin methyltransferase family. | 0.999 |
| ABK72513.1 | cobS | MSMEG_3873 | MSMEG_4277 | Cobalamin biosynthesis protein cobIJ; Identified by match to protein family HMM PF00590; match to protein family HMM TIGR01466; match to protein family HMM TIGR01467; Belongs to the precorrin methyltransferase family. | Cobalamin 5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.988 |
| ABK72764.1 | ABK70275.1 | MSMEG_1517 | MSMEG_3155 | Spfh domain/band 7 family protein, putative; Identified by match to protein family HMM PF01145. | Band 7 protein; Identified by match to protein family HMM PF01145. | 0.756 |
| ABK72764.1 | ABK71936.1 | MSMEG_1517 | MSMEG_3154 | Spfh domain/band 7 family protein, putative; Identified by match to protein family HMM PF01145. | Membrane protein implicated in regulation of membrane protease activity; Identified by match to protein family HMM PF01957. | 0.685 |
| ABK72764.1 | ABK74394.1 | MSMEG_1517 | MSMEG_4576 | Spfh domain/band 7 family protein, putative; Identified by match to protein family HMM PF01145. | SpfH domain protein; Identified by match to protein family HMM PF01145. | 0.757 |
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