Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70944.1 | ABK73714.1 | MSMEG_3182 | MSMEG_3180 | Hypothetical protein; Identified by Glimmer2; putative. | Transcriptional regulator, MerR family protein; Identified by match to protein family HMM PF00376. | 0.668 |
| ABK70944.1 | ABK75554.1 | MSMEG_3182 | MSMEG_3181 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.726 |
| ABK70944.1 | ABK76137.1 | MSMEG_3182 | MSMEG_3179 | Hypothetical protein; Identified by Glimmer2; putative. | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | 0.497 |
| ABK70944.1 | ilvA | MSMEG_3182 | MSMEG_3183 | Hypothetical protein; Identified by Glimmer2; putative. | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.491 |
| ABK73714.1 | ABK70944.1 | MSMEG_3180 | MSMEG_3182 | Transcriptional regulator, MerR family protein; Identified by match to protein family HMM PF00376. | Hypothetical protein; Identified by Glimmer2; putative. | 0.668 |
| ABK73714.1 | ABK75554.1 | MSMEG_3180 | MSMEG_3181 | Transcriptional regulator, MerR family protein; Identified by match to protein family HMM PF00376. | Conserved hypothetical protein. | 0.733 |
| ABK73714.1 | ABK76137.1 | MSMEG_3180 | MSMEG_3179 | Transcriptional regulator, MerR family protein; Identified by match to protein family HMM PF00376. | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | 0.578 |
| ABK73714.1 | ilvA | MSMEG_3180 | MSMEG_3183 | Transcriptional regulator, MerR family protein; Identified by match to protein family HMM PF00376. | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.454 |
| ABK75554.1 | ABK70944.1 | MSMEG_3181 | MSMEG_3182 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.726 |
| ABK75554.1 | ABK73714.1 | MSMEG_3181 | MSMEG_3180 | Conserved hypothetical protein. | Transcriptional regulator, MerR family protein; Identified by match to protein family HMM PF00376. | 0.733 |
| ABK75554.1 | ABK76137.1 | MSMEG_3181 | MSMEG_3179 | Conserved hypothetical protein. | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | 0.526 |
| ABK75554.1 | ilvA | MSMEG_3181 | MSMEG_3183 | Conserved hypothetical protein. | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | 0.472 |
| ABK76137.1 | ABK70944.1 | MSMEG_3179 | MSMEG_3182 | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | Hypothetical protein; Identified by Glimmer2; putative. | 0.497 |
| ABK76137.1 | ABK73714.1 | MSMEG_3179 | MSMEG_3180 | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | Transcriptional regulator, MerR family protein; Identified by match to protein family HMM PF00376. | 0.578 |
| ABK76137.1 | ABK75554.1 | MSMEG_3179 | MSMEG_3181 | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | Conserved hypothetical protein. | 0.526 |
| ilvA | ABK70944.1 | MSMEG_3183 | MSMEG_3182 | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | Hypothetical protein; Identified by Glimmer2; putative. | 0.491 |
| ilvA | ABK73714.1 | MSMEG_3183 | MSMEG_3180 | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | Transcriptional regulator, MerR family protein; Identified by match to protein family HMM PF00376. | 0.454 |
| ilvA | ABK75554.1 | MSMEG_3183 | MSMEG_3181 | Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA. | Conserved hypothetical protein. | 0.472 |