Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69953.1 | ABK72296.1 | MSMEG_2404 | MSMEG_0206 | Extracellular deoxyribonuclease. | Acyltransferase 3; Identified by match to protein family HMM PF01757. | 0.417 |
ABK69953.1 | ABK73478.1 | MSMEG_2404 | MSMEG_3187 | Extracellular deoxyribonuclease. | Putative acyltransferase domain protein; Identified by match to protein family HMM PF01757. | 0.495 |
ABK69953.1 | ABK74336.1 | MSMEG_2404 | MSMEG_5041 | Extracellular deoxyribonuclease. | Probable acyltransferase; Identified by match to protein family HMM PF01757. | 0.428 |
ABK69953.1 | ABK75288.1 | MSMEG_2404 | MSMEG_0319 | Extracellular deoxyribonuclease. | Acyltransferase; Identified by match to protein family HMM PF01757. | 0.424 |
ABK70482.1 | ABK71079.1 | MSMEG_5005 | MSMEG_6140 | LprC protein. | Membrane protein. | 0.423 |
ABK70482.1 | ABK73478.1 | MSMEG_5005 | MSMEG_3187 | LprC protein. | Putative acyltransferase domain protein; Identified by match to protein family HMM PF01757. | 0.458 |
ABK70482.1 | ABK73989.1 | MSMEG_5005 | MSMEG_3191 | LprC protein. | Conserved hypothetical protein. | 0.478 |
ABK71079.1 | ABK70482.1 | MSMEG_6140 | MSMEG_5005 | Membrane protein. | LprC protein. | 0.423 |
ABK71079.1 | ABK73478.1 | MSMEG_6140 | MSMEG_3187 | Membrane protein. | Putative acyltransferase domain protein; Identified by match to protein family HMM PF01757. | 0.463 |
ABK72296.1 | ABK69953.1 | MSMEG_0206 | MSMEG_2404 | Acyltransferase 3; Identified by match to protein family HMM PF01757. | Extracellular deoxyribonuclease. | 0.417 |
ABK72296.1 | ABK73328.1 | MSMEG_0206 | MSMEG_5044 | Acyltransferase 3; Identified by match to protein family HMM PF01757. | ATPase. | 0.541 |
ABK72296.1 | ABK73478.1 | MSMEG_0206 | MSMEG_3187 | Acyltransferase 3; Identified by match to protein family HMM PF01757. | Putative acyltransferase domain protein; Identified by match to protein family HMM PF01757. | 0.512 |
ABK73328.1 | ABK72296.1 | MSMEG_5044 | MSMEG_0206 | ATPase. | Acyltransferase 3; Identified by match to protein family HMM PF01757. | 0.541 |
ABK73328.1 | ABK73478.1 | MSMEG_5044 | MSMEG_3187 | ATPase. | Putative acyltransferase domain protein; Identified by match to protein family HMM PF01757. | 0.553 |
ABK73328.1 | ABK74336.1 | MSMEG_5044 | MSMEG_5041 | ATPase. | Probable acyltransferase; Identified by match to protein family HMM PF01757. | 0.725 |
ABK73328.1 | ABK75288.1 | MSMEG_5044 | MSMEG_0319 | ATPase. | Acyltransferase; Identified by match to protein family HMM PF01757. | 0.453 |
ABK73478.1 | ABK69953.1 | MSMEG_3187 | MSMEG_2404 | Putative acyltransferase domain protein; Identified by match to protein family HMM PF01757. | Extracellular deoxyribonuclease. | 0.495 |
ABK73478.1 | ABK70482.1 | MSMEG_3187 | MSMEG_5005 | Putative acyltransferase domain protein; Identified by match to protein family HMM PF01757. | LprC protein. | 0.458 |
ABK73478.1 | ABK71079.1 | MSMEG_3187 | MSMEG_6140 | Putative acyltransferase domain protein; Identified by match to protein family HMM PF01757. | Membrane protein. | 0.463 |
ABK73478.1 | ABK72296.1 | MSMEG_3187 | MSMEG_0206 | Putative acyltransferase domain protein; Identified by match to protein family HMM PF01757. | Acyltransferase 3; Identified by match to protein family HMM PF01757. | 0.512 |
page 1 of 2