STRINGSTRING
cydD cydD cydB cydB ABK70723.1 ABK70723.1 ABK74312.1 ABK74312.1 ABK71865.1 ABK71865.1 ABK75201.1 ABK75201.1 ABK75176.1 ABK75176.1 narI narI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cydDATP-binding cassette, subfamily C, bacterial CydD; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR02857. (509 aa)    
Predicted Functional Partners:
cydB
Cytochrome D ubiquinol oxidase, subunit II; Identified by match to protein family HMM PF02322; match to protein family HMM TIGR00203.
 
  
 0.998
ABK70723.1
Cytochrome D ubiquinol oxidase subunit 1; Identified by match to protein family HMM PF01654.
 
  
 0.990
ABK74312.1
Cytochrome bd ubiquinol oxidase, subunit I; Identified by match to protein family HMM PF01654.
 
  
 0.907
ABK71865.1
Cytochrome bd-I oxidase subunit II; Identified by match to protein family HMM PF02322.
 
  
 0.885
ABK75201.1
Integral membrane protein; Identified by match to protein family HMM PF03729.
  
    0.704
ABK75176.1
Nitrate reductase, alpha subunit; Identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM TIGR01580; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
   
  
 0.415
narI
Respiratory nitrate reductase, gamma subunit; Identified by match to protein family HMM PF02665; match to protein family HMM TIGR00351.
   
  
 0.403
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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