Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70105.1 | ABK70934.1 | MSMEG_3258 | MSMEG_3259 | Hypothetical protein; Identified by Glimmer2; putative. | acyl-CoA dehydrogenase; Identified by match to protein family HMM PF08028. | 0.629 |
| ABK70105.1 | ABK72885.1 | MSMEG_3258 | MSMEG_3260 | Hypothetical protein; Identified by Glimmer2; putative. | LysR-family protein transcriptional regulator; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | 0.525 |
| ABK70105.1 | ABK73797.1 | MSMEG_3258 | MSMEG_3261 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.454 |
| ABK70105.1 | xylB | MSMEG_3258 | MSMEG_3257 | Hypothetical protein; Identified by Glimmer2; putative. | Xylulokinase; Identified by similarity to SP:P09099; match to protein family HMM PF00370; match to protein family HMM PF02782; match to protein family HMM TIGR01312. | 0.779 |
| ABK70686.1 | ABK70934.1 | MSMEG_3850 | MSMEG_3259 | Identified by similarity to GB:AAB82564.1; match to protein family HMM PF00296. | acyl-CoA dehydrogenase; Identified by match to protein family HMM PF08028. | 0.643 |
| ABK70686.1 | ABK71554.1 | MSMEG_3850 | MSMEG_5519 | Identified by similarity to GB:AAB82564.1; match to protein family HMM PF00296. | Monooxygenase; Identified by match to protein family HMM PF00296. | 0.929 |
| ABK70686.1 | ABK73814.1 | MSMEG_3850 | MSMEG_2651 | Identified by similarity to GB:AAB82564.1; match to protein family HMM PF00296. | Alkanesulfonate monooxygenase family protein; Identified by similarity to SP:P40402. | 0.661 |
| ABK70934.1 | ABK70105.1 | MSMEG_3259 | MSMEG_3258 | acyl-CoA dehydrogenase; Identified by match to protein family HMM PF08028. | Hypothetical protein; Identified by Glimmer2; putative. | 0.629 |
| ABK70934.1 | ABK70686.1 | MSMEG_3259 | MSMEG_3850 | acyl-CoA dehydrogenase; Identified by match to protein family HMM PF08028. | Identified by similarity to GB:AAB82564.1; match to protein family HMM PF00296. | 0.643 |
| ABK70934.1 | ABK71554.1 | MSMEG_3259 | MSMEG_5519 | acyl-CoA dehydrogenase; Identified by match to protein family HMM PF08028. | Monooxygenase; Identified by match to protein family HMM PF00296. | 0.733 |
| ABK70934.1 | ABK71963.1 | MSMEG_3259 | MSMEG_2045 | acyl-CoA dehydrogenase; Identified by match to protein family HMM PF08028. | Monoxygenase; Identified by match to protein family HMM PF00296. | 0.638 |
| ABK70934.1 | ABK72885.1 | MSMEG_3259 | MSMEG_3260 | acyl-CoA dehydrogenase; Identified by match to protein family HMM PF08028. | LysR-family protein transcriptional regulator; Identified by match to protein family HMM PF00126; match to protein family HMM PF03466; Belongs to the LysR transcriptional regulatory family. | 0.649 |
| ABK70934.1 | ABK73797.1 | MSMEG_3259 | MSMEG_3261 | acyl-CoA dehydrogenase; Identified by match to protein family HMM PF08028. | Conserved hypothetical protein. | 0.706 |
| ABK70934.1 | ABK73814.1 | MSMEG_3259 | MSMEG_2651 | acyl-CoA dehydrogenase; Identified by match to protein family HMM PF08028. | Alkanesulfonate monooxygenase family protein; Identified by similarity to SP:P40402. | 0.651 |
| ABK70934.1 | ABK75988.1 | MSMEG_3259 | MSMEG_4389 | acyl-CoA dehydrogenase; Identified by match to protein family HMM PF08028. | Monooxygenase, NtaA/SnaA/SoxA family protein. | 0.657 |
| ABK70934.1 | ABK75990.1 | MSMEG_3259 | MSMEG_5720 | acyl-CoA dehydrogenase; Identified by match to protein family HMM PF08028. | Putative 3-hydroxyacyl-CoA dehydrogenase; Identified by match to protein family HMM PF00378; match to protein family HMM PF00725; match to protein family HMM PF02737. | 0.703 |
| ABK70934.1 | xylB | MSMEG_3259 | MSMEG_3257 | acyl-CoA dehydrogenase; Identified by match to protein family HMM PF08028. | Xylulokinase; Identified by similarity to SP:P09099; match to protein family HMM PF00370; match to protein family HMM PF02782; match to protein family HMM TIGR01312. | 0.641 |
| ABK71554.1 | ABK70686.1 | MSMEG_5519 | MSMEG_3850 | Monooxygenase; Identified by match to protein family HMM PF00296. | Identified by similarity to GB:AAB82564.1; match to protein family HMM PF00296. | 0.929 |
| ABK71554.1 | ABK70934.1 | MSMEG_5519 | MSMEG_3259 | Monooxygenase; Identified by match to protein family HMM PF00296. | acyl-CoA dehydrogenase; Identified by match to protein family HMM PF08028. | 0.733 |
| ABK71554.1 | ABK73814.1 | MSMEG_5519 | MSMEG_2651 | Monooxygenase; Identified by match to protein family HMM PF00296. | Alkanesulfonate monooxygenase family protein; Identified by similarity to SP:P40402. | 0.929 |
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