STRINGSTRING
ABK74371.1 ABK74371.1 ABK75875.1 ABK75875.1 ABK73353.1 ABK73353.1 ABK73759.1 ABK73759.1 ABK72474.1 ABK72474.1 ABK73580.1 ABK73580.1 ABK70110.1 ABK70110.1 ABK71698.1 ABK71698.1 ABK70648.1 ABK70648.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK74371.1Conserved hypothetical protein. (115 aa)    
Predicted Functional Partners:
ABK75875.1
Integral membrane protein; Identified by match to protein family HMM PF00892.
  
    0.665
ABK73353.1
LppM protein.
  
     0.530
ABK73759.1
LysM domain protein; Identified by match to protein family HMM PF01476.
  
     0.457
ABK72474.1
Conserved hypothetical protein.
  
    0.416
ABK73580.1
Putative transcriptional regulator; Identified by match to protein family HMM PF00440; match to protein family HMM PF02796.
  
    0.415
ABK70110.1
Conserved hypothetical protein.
  
    0.415
ABK71698.1
Conserved hypothetical protein.
  
    0.409
ABK70648.1
Heparin-binding hemagglutinin.
  
    0.405
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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