Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70698.1 | ABK70746.1 | MSMEG_3279 | MSMEG_0660 | Polyamine ABC transporter permease protein; Identified by match to protein family HMM PF00528. | Bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01409. | 0.980 |
| ABK70698.1 | ABK73031.1 | MSMEG_3279 | MSMEG_3280 | Polyamine ABC transporter permease protein; Identified by match to protein family HMM PF00528. | Polyamine-binding lipoprotein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01409. | 0.992 |
| ABK70698.1 | ABK73279.1 | MSMEG_3279 | MSMEG_3277 | Polyamine ABC transporter permease protein; Identified by match to protein family HMM PF00528. | Polyamine ABC transporter integral membrane protein; Identified by match to protein family HMM PF00528. | 0.996 |
| ABK70698.1 | ABK73489.1 | MSMEG_3279 | MSMEG_0658 | Polyamine ABC transporter permease protein; Identified by match to protein family HMM PF00528. | Polyamine ABC-transporter, inner membrane subunit; Identified by match to protein family HMM PF00528. | 0.978 |
| ABK70698.1 | ABK74220.1 | MSMEG_3279 | MSMEG_0659 | Polyamine ABC transporter permease protein; Identified by match to protein family HMM PF00528. | Polyamine ABC transporter permease protein; Identified by match to protein family HMM PF00528. | 0.919 |
| ABK70698.1 | ABK75398.1 | MSMEG_3279 | MSMEG_4764 | Polyamine ABC transporter permease protein; Identified by match to protein family HMM PF00528. | ABC transporter permease protein; Identified by match to protein family HMM PF00528. | 0.936 |
| ABK70698.1 | ABK75864.1 | MSMEG_3279 | MSMEG_6670 | Polyamine ABC transporter permease protein; Identified by match to protein family HMM PF00528. | ABC transporter, permease protein, putative; Identified by match to protein family HMM PF00528. | 0.882 |
| ABK70698.1 | potA | MSMEG_3279 | MSMEG_0662 | Polyamine ABC transporter permease protein; Identified by match to protein family HMM PF00528. | Putrescine transport ATP-binding protein PotG; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | 0.978 |
| ABK70698.1 | potA-2 | MSMEG_3279 | MSMEG_3281 | Polyamine ABC transporter permease protein; Identified by match to protein family HMM PF00528. | Spermidine/putrescine ABC transporter ATP-binding subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. | 0.988 |
| ABK70746.1 | ABK70698.1 | MSMEG_0660 | MSMEG_3279 | Bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01409. | Polyamine ABC transporter permease protein; Identified by match to protein family HMM PF00528. | 0.980 |
| ABK70746.1 | ABK73031.1 | MSMEG_0660 | MSMEG_3280 | Bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01409. | Polyamine-binding lipoprotein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01409. | 0.930 |
| ABK70746.1 | ABK73279.1 | MSMEG_0660 | MSMEG_3277 | Bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01409. | Polyamine ABC transporter integral membrane protein; Identified by match to protein family HMM PF00528. | 0.981 |
| ABK70746.1 | ABK73489.1 | MSMEG_0660 | MSMEG_0658 | Bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01409. | Polyamine ABC-transporter, inner membrane subunit; Identified by match to protein family HMM PF00528. | 0.994 |
| ABK70746.1 | ABK74220.1 | MSMEG_0660 | MSMEG_0659 | Bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01409. | Polyamine ABC transporter permease protein; Identified by match to protein family HMM PF00528. | 0.995 |
| ABK70746.1 | ABK74243.1 | MSMEG_0660 | MSMEG_4763 | Bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01409. | ABC transporter permease protein; Identified by match to protein family HMM PF00528. | 0.909 |
| ABK70746.1 | ABK75398.1 | MSMEG_0660 | MSMEG_4764 | Bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01409. | ABC transporter permease protein; Identified by match to protein family HMM PF00528. | 0.904 |
| ABK70746.1 | ABK75864.1 | MSMEG_0660 | MSMEG_6670 | Bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01409. | ABC transporter, permease protein, putative; Identified by match to protein family HMM PF00528. | 0.873 |
| ABK70746.1 | potA | MSMEG_0660 | MSMEG_0662 | Bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01409. | Putrescine transport ATP-binding protein PotG; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | 0.986 |
| ABK70746.1 | potA-2 | MSMEG_0660 | MSMEG_3281 | Bacterial extracellular solute-binding protein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01409. | Spermidine/putrescine ABC transporter ATP-binding subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family. | 0.973 |
| ABK73031.1 | ABK70698.1 | MSMEG_3280 | MSMEG_3279 | Polyamine-binding lipoprotein; Identified by match to protein family HMM PF01547; match to protein family HMM TIGR01409. | Polyamine ABC transporter permease protein; Identified by match to protein family HMM PF00528. | 0.992 |
page 1 of 5