STRINGSTRING
ABK72514.1 ABK72514.1 ABK72924.1 ABK72924.1 ABK69613.1 ABK69613.1 ABK73899.1 ABK73899.1 ABK71887.1 ABK71887.1 ABK72463.1 ABK72463.1 ABK76129.1 ABK76129.1 ABK74611.1 ABK74611.1 ABK75286.1 ABK75286.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72514.1Short-chain dehydrogenase/reductase SDR; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (294 aa)    
Predicted Functional Partners:
ABK72924.1
Identified by match to protein family HMM PF01408.
 
    0.827
ABK69613.1
Conserved hypothetical protein; Identified by match to protein family HMM PF00296.
  
  
 0.794
ABK73899.1
Short-chain dehydrogenase/reductase SDR; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370.
 
    0.638
ABK71887.1
Carboxylic ester hydrolase; Identified by match to protein family HMM PF03403.
 
    0.616
ABK72463.1
Short-chain dehydrogenase/reductase SDR.
 
    0.572
ABK76129.1
Succinate semialdehyde dehydrogenase; Identified by match to protein family HMM PF00171.
  
    0.525
ABK74611.1
NAD-dependent epimerase/dehydratase; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993.
 
    0.521
ABK75286.1
Glucose-1-dehydrogenase; Identified by match to protein family HMM PF00106.
 
    0.422
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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