Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK71391.1 | ABK72116.1 | MSMEG_3313 | MSMEG_3314 | Xylose repressor, putative; Identified by match to protein family HMM PF00480. | Identified by match to protein family HMM PF07690. | 0.606 |
| ABK72116.1 | ABK71391.1 | MSMEG_3314 | MSMEG_3313 | Identified by match to protein family HMM PF07690. | Xylose repressor, putative; Identified by match to protein family HMM PF00480. | 0.606 |
| ABK72116.1 | ABK72406.1 | MSMEG_3314 | MSMEG_2810 | Identified by match to protein family HMM PF07690. | Major facilitator superfamily protein; Identified by match to protein family HMM PF07690. | 0.450 |
| ABK72116.1 | ABK73473.1 | MSMEG_3314 | MSMEG_2795 | Identified by match to protein family HMM PF07690. | Transmembrane transport protein; Identified by match to protein family HMM PF07690. | 0.480 |
| ABK72116.1 | panD | MSMEG_3314 | MSMEG_0021 | Identified by match to protein family HMM PF07690. | Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.667 |
| ABK72116.1 | rpsA | MSMEG_3314 | MSMEG_3833 | Identified by match to protein family HMM PF07690. | 30S ribosomal protein S1; Binds mRNA, facilitating recognition of most mRNAs by the 30S ribosomal subunit during translation initiation (By similarity). Plays a role in trans-translation; binds tmRNA (the product of the ssrA gene). Binds very poorly to pyrazinoic acid (POA), the active form of the prodrug pyrazinamide (PZA); POA does not disrupt trans-translation in this organism. M.smegmatis is resistant to the antibiotic PZA. In trans-translation Ala-aminoacylated transfer-messenger RNA (tmRNA, product of the ssrA gene; the 2 termini fold to resemble tRNA(Ala) while it encodes a shor [...] | 0.738 |
| ABK72406.1 | ABK72116.1 | MSMEG_2810 | MSMEG_3314 | Major facilitator superfamily protein; Identified by match to protein family HMM PF07690. | Identified by match to protein family HMM PF07690. | 0.450 |
| ABK73473.1 | ABK72116.1 | MSMEG_2795 | MSMEG_3314 | Transmembrane transport protein; Identified by match to protein family HMM PF07690. | Identified by match to protein family HMM PF07690. | 0.480 |
| panD | ABK72116.1 | MSMEG_0021 | MSMEG_3314 | Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | Identified by match to protein family HMM PF07690. | 0.667 |
| panD | rpsA | MSMEG_0021 | MSMEG_3833 | Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 30S ribosomal protein S1; Binds mRNA, facilitating recognition of most mRNAs by the 30S ribosomal subunit during translation initiation (By similarity). Plays a role in trans-translation; binds tmRNA (the product of the ssrA gene). Binds very poorly to pyrazinoic acid (POA), the active form of the prodrug pyrazinamide (PZA); POA does not disrupt trans-translation in this organism. M.smegmatis is resistant to the antibiotic PZA. In trans-translation Ala-aminoacylated transfer-messenger RNA (tmRNA, product of the ssrA gene; the 2 termini fold to resemble tRNA(Ala) while it encodes a shor [...] | 0.929 |
| rpsA | ABK72116.1 | MSMEG_3833 | MSMEG_3314 | 30S ribosomal protein S1; Binds mRNA, facilitating recognition of most mRNAs by the 30S ribosomal subunit during translation initiation (By similarity). Plays a role in trans-translation; binds tmRNA (the product of the ssrA gene). Binds very poorly to pyrazinoic acid (POA), the active form of the prodrug pyrazinamide (PZA); POA does not disrupt trans-translation in this organism. M.smegmatis is resistant to the antibiotic PZA. In trans-translation Ala-aminoacylated transfer-messenger RNA (tmRNA, product of the ssrA gene; the 2 termini fold to resemble tRNA(Ala) while it encodes a shor [...] | Identified by match to protein family HMM PF07690. | 0.738 |
| rpsA | panD | MSMEG_3833 | MSMEG_0021 | 30S ribosomal protein S1; Binds mRNA, facilitating recognition of most mRNAs by the 30S ribosomal subunit during translation initiation (By similarity). Plays a role in trans-translation; binds tmRNA (the product of the ssrA gene). Binds very poorly to pyrazinoic acid (POA), the active form of the prodrug pyrazinamide (PZA); POA does not disrupt trans-translation in this organism. M.smegmatis is resistant to the antibiotic PZA. In trans-translation Ala-aminoacylated transfer-messenger RNA (tmRNA, product of the ssrA gene; the 2 termini fold to resemble tRNA(Ala) while it encodes a shor [...] | Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.929 |