Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69878.1 | ABK70399.1 | MSMEG_3316 | MSMEG_3319 | Transporter, major facilitator family protein; Identified by match to protein family HMM PF07690. | Identified by match to protein family HMM PF00440. | 0.594 |
ABK69878.1 | ABK71037.1 | MSMEG_3316 | MSMEG_3318 | Transporter, major facilitator family protein; Identified by match to protein family HMM PF07690. | Oxidoreductase; Identified by match to protein family HMM PF01494. | 0.816 |
ABK70024.1 | ABK71037.1 | MSMEG_0147 | MSMEG_3318 | C-5 sterol desaturase. | Oxidoreductase; Identified by match to protein family HMM PF01494. | 0.518 |
ABK70024.1 | ABK76171.1 | MSMEG_0147 | MSMEG_4641 | C-5 sterol desaturase. | Salicylate hydroxylase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | 0.513 |
ABK70024.1 | ABK76239.1 | MSMEG_0147 | MSMEG_1649 | C-5 sterol desaturase. | FAD dependent oxidoreductase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | 0.514 |
ABK70399.1 | ABK69878.1 | MSMEG_3319 | MSMEG_3316 | Identified by match to protein family HMM PF00440. | Transporter, major facilitator family protein; Identified by match to protein family HMM PF07690. | 0.594 |
ABK70399.1 | ABK71037.1 | MSMEG_3319 | MSMEG_3318 | Identified by match to protein family HMM PF00440. | Oxidoreductase; Identified by match to protein family HMM PF01494. | 0.581 |
ABK70399.1 | ABK76171.1 | MSMEG_3319 | MSMEG_4641 | Identified by match to protein family HMM PF00440. | Salicylate hydroxylase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | 0.648 |
ABK71037.1 | ABK69878.1 | MSMEG_3318 | MSMEG_3316 | Oxidoreductase; Identified by match to protein family HMM PF01494. | Transporter, major facilitator family protein; Identified by match to protein family HMM PF07690. | 0.816 |
ABK71037.1 | ABK70024.1 | MSMEG_3318 | MSMEG_0147 | Oxidoreductase; Identified by match to protein family HMM PF01494. | C-5 sterol desaturase. | 0.518 |
ABK71037.1 | ABK70399.1 | MSMEG_3318 | MSMEG_3319 | Oxidoreductase; Identified by match to protein family HMM PF01494. | Identified by match to protein family HMM PF00440. | 0.581 |
ABK71037.1 | ABK71145.1 | MSMEG_3318 | MSMEG_3529 | Oxidoreductase; Identified by match to protein family HMM PF01494. | Fatty acid hydroxylase; Identified by match to protein family HMM PF04116. | 0.517 |
ABK71037.1 | ABK72784.1 | MSMEG_3318 | MSMEG_3666 | Oxidoreductase; Identified by match to protein family HMM PF01494. | C-5 sterol desaturase. | 0.508 |
ABK71037.1 | ABK72970.1 | MSMEG_3318 | MSMEG_2481 | Oxidoreductase; Identified by match to protein family HMM PF01494. | Conserved hypothetical protein. | 0.498 |
ABK71037.1 | ABK73356.1 | MSMEG_3318 | MSMEG_2812 | Oxidoreductase; Identified by match to protein family HMM PF01494. | C-5 sterol desaturase. | 0.520 |
ABK71037.1 | ABK74335.1 | MSMEG_3318 | MSMEG_4066 | Oxidoreductase; Identified by match to protein family HMM PF01494. | Conserved hypothetical protein. | 0.506 |
ABK71037.1 | ABK76171.1 | MSMEG_3318 | MSMEG_4641 | Oxidoreductase; Identified by match to protein family HMM PF01494. | Salicylate hydroxylase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | 0.573 |
ABK71037.1 | ABK76239.1 | MSMEG_3318 | MSMEG_1649 | Oxidoreductase; Identified by match to protein family HMM PF01494. | FAD dependent oxidoreductase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | 0.562 |
ABK71145.1 | ABK71037.1 | MSMEG_3529 | MSMEG_3318 | Fatty acid hydroxylase; Identified by match to protein family HMM PF04116. | Oxidoreductase; Identified by match to protein family HMM PF01494. | 0.517 |
ABK71145.1 | ABK76171.1 | MSMEG_3529 | MSMEG_4641 | Fatty acid hydroxylase; Identified by match to protein family HMM PF04116. | Salicylate hydroxylase; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494. | 0.517 |
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