Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK69658.1 | ABK71220.1 | MSMEG_6130 | MSMEG_1803 | Two-component sensor protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF05227. | RsbW protein. | 0.818 |
ABK69658.1 | ABK71286.1 | MSMEG_6130 | MSMEG_1787 | Two-component sensor protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF05227. | RsbW protein. | 0.857 |
ABK69658.1 | ABK75347.1 | MSMEG_6130 | MSMEG_3323 | Two-component sensor protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF05227. | Conserved hypothetical protein. | 0.623 |
ABK69658.1 | ABK75635.1 | MSMEG_6130 | MSMEG_5551 | Two-component sensor protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF05227. | Stas domain protein; Identified by match to protein family HMM PF01740. | 0.737 |
ABK69658.1 | ABK76188.1 | MSMEG_6130 | MSMEG_6131 | Two-component sensor protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF05227. | Magnesium or manganese-dependent protein phosphatase; Identified by match to protein family HMM PF00072; match to protein family HMM PF07228. | 0.996 |
ABK70470.1 | ABK75347.1 | MSMEG_1237 | MSMEG_3323 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.756 |
ABK71220.1 | ABK69658.1 | MSMEG_1803 | MSMEG_6130 | RsbW protein. | Two-component sensor protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF05227. | 0.818 |
ABK71220.1 | ABK75347.1 | MSMEG_1803 | MSMEG_3323 | RsbW protein. | Conserved hypothetical protein. | 0.675 |
ABK71220.1 | ABK75635.1 | MSMEG_1803 | MSMEG_5551 | RsbW protein. | Stas domain protein; Identified by match to protein family HMM PF01740. | 0.440 |
ABK71220.1 | ABK76188.1 | MSMEG_1803 | MSMEG_6131 | RsbW protein. | Magnesium or manganese-dependent protein phosphatase; Identified by match to protein family HMM PF00072; match to protein family HMM PF07228. | 0.946 |
ABK71220.1 | FbiC | MSMEG_1803 | MSMEG_5126 | RsbW protein. | FO synthase; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR00423. | 0.783 |
ABK71286.1 | ABK69658.1 | MSMEG_1787 | MSMEG_6130 | RsbW protein. | Two-component sensor protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF05227. | 0.857 |
ABK71286.1 | ABK75347.1 | MSMEG_1787 | MSMEG_3323 | RsbW protein. | Conserved hypothetical protein. | 0.665 |
ABK71286.1 | ABK76188.1 | MSMEG_1787 | MSMEG_6131 | RsbW protein. | Magnesium or manganese-dependent protein phosphatase; Identified by match to protein family HMM PF00072; match to protein family HMM PF07228. | 0.942 |
ABK71286.1 | FbiC | MSMEG_1787 | MSMEG_5126 | RsbW protein. | FO synthase; Identified by match to protein family HMM PF04055; match to protein family HMM TIGR00423. | 0.678 |
ABK72533.1 | ABK75347.1 | MSMEG_1366 | MSMEG_3323 | ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. | Conserved hypothetical protein. | 0.662 |
ABK72628.1 | ABK75347.1 | MSMEG_6237 | MSMEG_3323 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.574 |
ABK74787.1 | ABK75347.1 | MSMEG_3324 | MSMEG_3323 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.597 |
ABK75347.1 | ABK69658.1 | MSMEG_3323 | MSMEG_6130 | Conserved hypothetical protein. | Two-component sensor protein; Identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; match to protein family HMM PF05227. | 0.623 |
ABK75347.1 | ABK70470.1 | MSMEG_3323 | MSMEG_1237 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.756 |
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