Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70022.1 | ABK70601.1 | MSMEG_6485 | MSMEG_5352 | ATP binding protein; Identified by match to protein family HMM PF01243. | Conserved hypothetical protein. | 0.408 |
| ABK70022.1 | ABK74867.1 | MSMEG_6485 | MSMEG_3330 | ATP binding protein; Identified by match to protein family HMM PF01243. | Conserved domain protein; Identified by match to protein family HMM PF05532; Belongs to the UPF0337 (CsbD) family. | 0.571 |
| ABK70022.1 | ABK74887.1 | MSMEG_6485 | MSMEG_0356 | ATP binding protein; Identified by match to protein family HMM PF01243. | Acetyltransferase. | 0.420 |
| ABK70601.1 | ABK70022.1 | MSMEG_5352 | MSMEG_6485 | Conserved hypothetical protein. | ATP binding protein; Identified by match to protein family HMM PF01243. | 0.408 |
| ABK70601.1 | ABK72113.1 | MSMEG_5352 | MSMEG_0964 | Conserved hypothetical protein. | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | 0.415 |
| ABK70601.1 | ABK72943.1 | MSMEG_5352 | MSMEG_5170 | Conserved hypothetical protein. | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | 0.424 |
| ABK70601.1 | ABK73917.1 | MSMEG_5352 | MSMEG_0048 | Conserved hypothetical protein. | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | 0.409 |
| ABK70601.1 | ABK74867.1 | MSMEG_5352 | MSMEG_3330 | Conserved hypothetical protein. | Conserved domain protein; Identified by match to protein family HMM PF05532; Belongs to the UPF0337 (CsbD) family. | 0.585 |
| ABK70601.1 | ABK75472.1 | MSMEG_5352 | MSMEG_3880 | Conserved hypothetical protein. | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Identified by match to protein family HMM PF01243. | 0.417 |
| ABK70630.1 | ABK74867.1 | MSMEG_3332 | MSMEG_3330 | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440; match to protein family HMM PF02909. | Conserved domain protein; Identified by match to protein family HMM PF05532; Belongs to the UPF0337 (CsbD) family. | 0.546 |
| ABK70630.1 | ABK75737.1 | MSMEG_3332 | MSMEG_3331 | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440; match to protein family HMM PF02909. | Hypothetical protein; Identified by Glimmer2; putative. | 0.503 |
| ABK70916.1 | ABK74867.1 | MSMEG_3329 | MSMEG_3330 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved domain protein; Identified by match to protein family HMM PF05532; Belongs to the UPF0337 (CsbD) family. | 0.701 |
| ABK70916.1 | ABK75737.1 | MSMEG_3329 | MSMEG_3331 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.602 |
| ABK72113.1 | ABK70601.1 | MSMEG_0964 | MSMEG_5352 | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | Conserved hypothetical protein. | 0.415 |
| ABK72113.1 | ABK74867.1 | MSMEG_0964 | MSMEG_3330 | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | Conserved domain protein; Identified by match to protein family HMM PF05532; Belongs to the UPF0337 (CsbD) family. | 0.627 |
| ABK72113.1 | ABK74887.1 | MSMEG_0964 | MSMEG_0356 | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | Acetyltransferase. | 0.420 |
| ABK72943.1 | ABK70601.1 | MSMEG_5170 | MSMEG_5352 | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | Conserved hypothetical protein. | 0.424 |
| ABK72943.1 | ABK73917.1 | MSMEG_5170 | MSMEG_0048 | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | 0.616 |
| ABK72943.1 | ABK74867.1 | MSMEG_5170 | MSMEG_3330 | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | Conserved domain protein; Identified by match to protein family HMM PF05532; Belongs to the UPF0337 (CsbD) family. | 0.574 |
| ABK72943.1 | ABK74887.1 | MSMEG_5170 | MSMEG_0356 | Pyridoxamine 5'-phosphate oxidase family protein; Identified by match to protein family HMM PF01243. | Acetyltransferase. | 0.431 |
page 1 of 3