STRINGSTRING
ABK69791.1 ABK69791.1 ABK76035.1 ABK76035.1 ABK73613.1 ABK73613.1 ABK70731.1 ABK70731.1 ABK75065.1 ABK75065.1 ABK70357.1 ABK70357.1 ABK69769.1 ABK69769.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Experiments
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[Homology]
Score
ABK69791.1Trap dicarboxylate transporter, dctq subunit, putative. (172 aa)    
Predicted Functional Partners:
ABK76035.1
TRAP transporter, DctM-like membrane protein; Identified by match to protein family HMM PF06808.
 
 
  0.991
ABK73613.1
Bacterial extracellular solute-binding protein, family protein 7; Identified by match to protein family HMM PF03480.
 
    0.946
ABK70731.1
Putative hydroxyacid aldolase; Identified by match to protein family HMM PF03328; Belongs to the HpcH/HpaI aldolase family.
 
    0.838
ABK75065.1
Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Identified by match to protein family HMM PF00795.
  
    0.782
ABK70357.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.719
ABK69769.1
Transcriptional regulator, GntR family protein; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.
       0.550
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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