Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70003.1 | ABK72770.1 | MSMEG_4509 | MSMEG_3359 | MbtG protein. | Cis-3-chloroacrylic acid dehalogenase, putative; Identified by match to protein family HMM PF01361. | 0.520 |
| ABK72108.1 | ABK72770.1 | MSMEG_3484 | MSMEG_3359 | Cupin domain protein; Identified by match to protein family HMM PF07883. | Cis-3-chloroacrylic acid dehalogenase, putative; Identified by match to protein family HMM PF01361. | 0.492 |
| ABK72108.1 | ABK74743.1 | MSMEG_3484 | MSMEG_6625 | Cupin domain protein; Identified by match to protein family HMM PF07883. | Identified by match to protein family HMM PF00903. | 0.501 |
| ABK72108.1 | ABK75647.1 | MSMEG_3484 | MSMEG_4156 | Cupin domain protein; Identified by match to protein family HMM PF07883. | Putative transposase; Identified by match to protein family HMM PF00589. | 0.656 |
| ABK72770.1 | ABK70003.1 | MSMEG_3359 | MSMEG_4509 | Cis-3-chloroacrylic acid dehalogenase, putative; Identified by match to protein family HMM PF01361. | MbtG protein. | 0.520 |
| ABK72770.1 | ABK72108.1 | MSMEG_3359 | MSMEG_3484 | Cis-3-chloroacrylic acid dehalogenase, putative; Identified by match to protein family HMM PF01361. | Cupin domain protein; Identified by match to protein family HMM PF07883. | 0.492 |
| ABK72770.1 | ABK73423.1 | MSMEG_3359 | MSMEG_3584 | Cis-3-chloroacrylic acid dehalogenase, putative; Identified by match to protein family HMM PF01361. | Membrane protein, MmpL family protein; Identified by match to protein family HMM PF03176. | 0.586 |
| ABK72770.1 | ABK73570.1 | MSMEG_3359 | MSMEG_4885 | Cis-3-chloroacrylic acid dehalogenase, putative; Identified by match to protein family HMM PF01361. | Conserved hypothetical protein. | 0.568 |
| ABK72770.1 | ABK74743.1 | MSMEG_3359 | MSMEG_6625 | Cis-3-chloroacrylic acid dehalogenase, putative; Identified by match to protein family HMM PF01361. | Identified by match to protein family HMM PF00903. | 0.484 |
| ABK72770.1 | ABK75647.1 | MSMEG_3359 | MSMEG_4156 | Cis-3-chloroacrylic acid dehalogenase, putative; Identified by match to protein family HMM PF01361. | Putative transposase; Identified by match to protein family HMM PF00589. | 0.677 |
| ABK72770.1 | ABK75975.1 | MSMEG_3359 | MSMEG_3805 | Cis-3-chloroacrylic acid dehalogenase, putative; Identified by match to protein family HMM PF01361. | Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.839 |
| ABK72770.1 | ectA | MSMEG_3359 | MSMEG_3901 | Cis-3-chloroacrylic acid dehalogenase, putative; Identified by match to protein family HMM PF01361. | L-2,4-diaminobutyric acid acetyltransferase; Catalyzes the acetylation of L-2,4-diaminobutyrate (DABA) to gamma-N-acetyl-alpha,gamma-diaminobutyric acid (ADABA) with acetyl coenzyme A. | 0.586 |
| ABK72770.1 | ectB | MSMEG_3359 | MSMEG_3900 | Cis-3-chloroacrylic acid dehalogenase, putative; Identified by match to protein family HMM PF01361. | Diaminobutyrate--2-oxoglutarate aminotransferase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.511 |
| ABK72770.1 | pcaB | MSMEG_3359 | MSMEG_2603 | Cis-3-chloroacrylic acid dehalogenase, putative; Identified by match to protein family HMM PF01361. | 3-carboxy-cis,cis-muconate cycloisomerase; Identified by match to protein family HMM PF00206; match to protein family HMM TIGR02426. | 0.488 |
| ABK73423.1 | ABK72770.1 | MSMEG_3584 | MSMEG_3359 | Membrane protein, MmpL family protein; Identified by match to protein family HMM PF03176. | Cis-3-chloroacrylic acid dehalogenase, putative; Identified by match to protein family HMM PF01361. | 0.586 |
| ABK73423.1 | ABK75975.1 | MSMEG_3584 | MSMEG_3805 | Membrane protein, MmpL family protein; Identified by match to protein family HMM PF03176. | Oxidoreductase, short chain dehydrogenase/reductase family protein; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.592 |
| ABK73423.1 | ectA | MSMEG_3584 | MSMEG_3901 | Membrane protein, MmpL family protein; Identified by match to protein family HMM PF03176. | L-2,4-diaminobutyric acid acetyltransferase; Catalyzes the acetylation of L-2,4-diaminobutyrate (DABA) to gamma-N-acetyl-alpha,gamma-diaminobutyric acid (ADABA) with acetyl coenzyme A. | 0.591 |
| ABK73423.1 | ectB | MSMEG_3584 | MSMEG_3900 | Membrane protein, MmpL family protein; Identified by match to protein family HMM PF03176. | Diaminobutyrate--2-oxoglutarate aminotransferase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.516 |
| ABK73570.1 | ABK72770.1 | MSMEG_4885 | MSMEG_3359 | Conserved hypothetical protein. | Cis-3-chloroacrylic acid dehalogenase, putative; Identified by match to protein family HMM PF01361. | 0.568 |
| ABK73570.1 | ABK75647.1 | MSMEG_4885 | MSMEG_4156 | Conserved hypothetical protein. | Putative transposase; Identified by match to protein family HMM PF00589. | 0.433 |
page 1 of 2