STRINGSTRING
ABK75376.1 ABK75376.1 ABK74189.1 ABK74189.1 ABK75970.1 ABK75970.1 ABK75865.1 ABK75865.1 ABK71671.1 ABK71671.1 ABK73414.1 ABK73414.1 ABK72624.1 ABK72624.1 ABK75293.1 ABK75293.1 ABK70786.1 ABK70786.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK75376.1Identified by match to protein family HMM PF01810. (208 aa)    
Predicted Functional Partners:
ABK74189.1
Regulatory protein, TetR; Identified by match to protein family HMM PF00440.
 
    0.835
ABK75970.1
Identified by match to protein family HMM PF01810.
  
     0.722
ABK75865.1
Identified by match to protein family HMM PF01810.
  
     0.705
ABK71671.1
Transcriptional regulator, AraC family protein; Identified by match to protein family HMM PF00165; match to protein family HMM PF01965.
  
    0.581
ABK73414.1
enoyl-CoA hydratase; Identified by match to protein family HMM PF00378.
  
    0.519
ABK72624.1
Isonitrile hydratase, putative; Identified by match to protein family HMM PF01965.
  
    0.492
ABK75293.1
Identified by match to protein family HMM PF01047; match to protein family HMM PF01978.
 
  
 0.424
ABK70786.1
Short-chain dehydrogenase/reductase SDR; Identified by match to protein family HMM PF00106.
  
    0.421
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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