Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK71671.1 | ABK72129.1 | MSMEG_3365 | MSMEG_5680 | Transcriptional regulator, AraC family protein; Identified by match to protein family HMM PF00165; match to protein family HMM PF01965. | Identified by match to protein family HMM PF00903. | 0.629 |
| ABK71671.1 | ABK72624.1 | MSMEG_3365 | MSMEG_3366 | Transcriptional regulator, AraC family protein; Identified by match to protein family HMM PF00165; match to protein family HMM PF01965. | Isonitrile hydratase, putative; Identified by match to protein family HMM PF01965. | 0.765 |
| ABK71671.1 | ABK73067.1 | MSMEG_3365 | MSMEG_5032 | Transcriptional regulator, AraC family protein; Identified by match to protein family HMM PF00165; match to protein family HMM PF01965. | Putative transcriptional regulator; Identified by match to protein family HMM PF01638. | 0.610 |
| ABK71671.1 | ABK74189.1 | MSMEG_3365 | MSMEG_3363 | Transcriptional regulator, AraC family protein; Identified by match to protein family HMM PF00165; match to protein family HMM PF01965. | Regulatory protein, TetR; Identified by match to protein family HMM PF00440. | 0.667 |
| ABK71671.1 | ABK74597.1 | MSMEG_3365 | MSMEG_6421 | Transcriptional regulator, AraC family protein; Identified by match to protein family HMM PF00165; match to protein family HMM PF01965. | Transcriptional regulator; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350. | 0.603 |
| ABK71671.1 | ABK74820.1 | MSMEG_3365 | MSMEG_5396 | Transcriptional regulator, AraC family protein; Identified by match to protein family HMM PF00165; match to protein family HMM PF01965. | KDP operon transcriptional regulatory protein KdpE; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. | 0.593 |
| ABK71671.1 | ABK75039.1 | MSMEG_3365 | MSMEG_1420 | Transcriptional regulator, AraC family protein; Identified by match to protein family HMM PF00165; match to protein family HMM PF01965. | Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | 0.607 |
| ABK71671.1 | ABK75155.1 | MSMEG_3365 | MSMEG_0213 | Transcriptional regulator, AraC family protein; Identified by match to protein family HMM PF00165; match to protein family HMM PF01965. | Transcriptional regulator; Identified by match to protein family HMM PF00165. | 0.581 |
| ABK71671.1 | ABK75689.1 | MSMEG_3365 | MSMEG_2043 | Transcriptional regulator, AraC family protein; Identified by match to protein family HMM PF00165; match to protein family HMM PF01965. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.603 |
| ABK71671.1 | sir2 | MSMEG_3365 | MSMEG_5175 | Transcriptional regulator, AraC family protein; Identified by match to protein family HMM PF00165; match to protein family HMM PF01965. | NAD-dependent deacetylase; NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form. | 0.595 |
| ABK72129.1 | ABK71671.1 | MSMEG_5680 | MSMEG_3365 | Identified by match to protein family HMM PF00903. | Transcriptional regulator, AraC family protein; Identified by match to protein family HMM PF00165; match to protein family HMM PF01965. | 0.629 |
| ABK72129.1 | ABK73067.1 | MSMEG_5680 | MSMEG_5032 | Identified by match to protein family HMM PF00903. | Putative transcriptional regulator; Identified by match to protein family HMM PF01638. | 0.690 |
| ABK72129.1 | ABK74597.1 | MSMEG_5680 | MSMEG_6421 | Identified by match to protein family HMM PF00903. | Transcriptional regulator; Identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350. | 0.595 |
| ABK72129.1 | ABK74820.1 | MSMEG_5680 | MSMEG_5396 | Identified by match to protein family HMM PF00903. | KDP operon transcriptional regulatory protein KdpE; Identified by match to protein family HMM PF00072; match to protein family HMM PF00486. | 0.679 |
| ABK72129.1 | ABK75039.1 | MSMEG_5680 | MSMEG_1420 | Identified by match to protein family HMM PF00903. | Probable transcriptional regulatory protein; Identified by match to protein family HMM PF00440. | 0.606 |
| ABK72129.1 | ABK75689.1 | MSMEG_5680 | MSMEG_2043 | Identified by match to protein family HMM PF00903. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.605 |
| ABK72129.1 | sir2 | MSMEG_5680 | MSMEG_5175 | Identified by match to protein family HMM PF00903. | NAD-dependent deacetylase; NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form. | 0.609 |
| ABK72624.1 | ABK71671.1 | MSMEG_3366 | MSMEG_3365 | Isonitrile hydratase, putative; Identified by match to protein family HMM PF01965. | Transcriptional regulator, AraC family protein; Identified by match to protein family HMM PF00165; match to protein family HMM PF01965. | 0.765 |
| ABK72624.1 | ABK74189.1 | MSMEG_3366 | MSMEG_3363 | Isonitrile hydratase, putative; Identified by match to protein family HMM PF01965. | Regulatory protein, TetR; Identified by match to protein family HMM PF00440. | 0.584 |
| ABK73067.1 | ABK71671.1 | MSMEG_5032 | MSMEG_3365 | Putative transcriptional regulator; Identified by match to protein family HMM PF01638. | Transcriptional regulator, AraC family protein; Identified by match to protein family HMM PF00165; match to protein family HMM PF01965. | 0.610 |
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