STRINGSTRING
ABK70695.1 ABK70695.1 ABK69797.1 ABK69797.1 ABK70687.1 ABK70687.1 ABK70609.1 ABK70609.1 pks pks ABK73818.1 ABK73818.1 ABK71854.1 ABK71854.1 ABK70115.1 ABK70115.1 ybeY ybeY ABK69677.1 ABK69677.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK70695.1Beta-lactamase; Identified by match to protein family HMM PF00753. (304 aa)    
Predicted Functional Partners:
ABK69797.1
Alcohol dehydrogenase; Identified by match to protein family HMM PF00732; match to protein family HMM PF05199.
  
  
 0.738
ABK70687.1
Identified by match to protein family HMM PF00196.
 
 
 
 0.516
ABK70609.1
Identified by match to protein family HMM PF00857.
 
 
 0.510
pks
Type I modular polyketide synthase; Identified by match to protein family HMM PF00106; match to protein family HMM PF00107; match to protein family HMM PF00109; match to protein family HMM PF00550; match to protein family HMM PF00698; match to protein family HMM PF01370; match to protein family HMM PF02801.
 
 
 0.480
ABK73818.1
Rhodanese domain protein/cystathionine beta-lyase.
 
 
 0.454
ABK71854.1
Putative long-chain fatty-acid--CoA ligase; Identified by match to protein family HMM PF00501; match to protein family HMM PF00550; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF07993; match to protein family HMM TIGR01746.
 
 
 0.450
ABK70115.1
Putative esterase.
 
  
 0.419
ybeY
Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.
  
 
 0.414
ABK69677.1
Molybdopterin biosynthesis protein MoeB; Identified by match to protein family HMM PF00581; match to protein family HMM PF00899; match to protein family HMM PF05237.
  
 
 0.404
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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