STRINGSTRING
ABK72226.1 ABK72226.1 ABK72579.1 ABK72579.1 ABK73996.1 ABK73996.1 ABK73649.1 ABK73649.1 ABK75122.1 ABK75122.1 ABK71203.1 ABK71203.1 ABK70807.1 ABK70807.1 ABK72253.1 ABK72253.1 ABK73193.1 ABK73193.1 ABK76004.1 ABK76004.1 ABK73334.1 ABK73334.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK72226.1Hypothetical protein; Identified by Glimmer2; putative. (161 aa)    
Predicted Functional Partners:
ABK72579.1
Isoflavone reductase; Identified by match to protein family HMM PF05368.
  
  
 0.783
ABK73996.1
Shikimate transporter; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690.
  
    0.779
ABK73649.1
Aldehyde dehydrogenase (NAD) family protein; Identified by match to protein family HMM PF00171; Belongs to the aldehyde dehydrogenase family.
  
    0.777
ABK75122.1
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; Identified by match to protein family HMM PF00107.
  
    0.776
ABK71203.1
Hypothetical protein; Identified by Glimmer2; putative.
  
    0.559
ABK70807.1
Putative acetolactate synthase; Identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; Belongs to the TPP enzyme family.
  
    0.539
ABK72253.1
enoyl-CoA hydratase; Identified by match to protein family HMM PF00378; Belongs to the enoyl-CoA hydratase/isomerase family.
  
    0.496
ABK73193.1
Cupin domain protein; Identified by match to protein family HMM PF07883.
  
    0.418
ABK76004.1
acyl-CoA dehydrogenase domain protein; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770.
  
    0.410
ABK73334.1
Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441.
  
    0.406
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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