STRINGSTRING
ABK74016.1 ABK74016.1 ABK73193.1 ABK73193.1 ABK76004.1 ABK76004.1 ABK73334.1 ABK73334.1 ABK70201.1 ABK70201.1 ABK73303.1 ABK73303.1 ABK70103.1 ABK70103.1 ABK70903.1 ABK70903.1 ABK70443.1 ABK70443.1 ABK72716.1 ABK72716.1 ABK73598.1 ABK73598.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK74016.1Short chain dehydrogenase; Identified by match to protein family HMM PF00106. (258 aa)    
Predicted Functional Partners:
ABK73193.1
Cupin domain protein; Identified by match to protein family HMM PF07883.
 
    0.875
ABK76004.1
acyl-CoA dehydrogenase domain protein; Identified by match to protein family HMM PF00441; match to protein family HMM PF02770.
  
  0.786
ABK73334.1
Putative acyl-CoA dehydrogenase; Identified by match to protein family HMM PF00441.
  
  0.782
ABK70201.1
3-oxoacyl-[acyl-carrier-protein] reductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370.
  
    0.760
ABK73303.1
2-deoxy-D-gluconate 3-dehydrogenase; Identified by match to protein family HMM PF00106.
  
     0.744
ABK70103.1
Fatty acid synthase; Identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801.
  
 0.742
ABK70903.1
acetoacetyl-CoA reductase.
  
    0.738
ABK70443.1
Short-chain dehydrogenase/reductase SDR; Identified by match to protein family HMM PF00106.
  
     0.738
ABK72716.1
Glucose 1-dehydrogenase, putative; Identified by match to protein family HMM PF00106.
  
    0.734
ABK73598.1
L-carnitine dehydratase/bile acid-inducible protein F; Identified by match to protein family HMM PF02515; Belongs to the CoA-transferase III family.
  
   0.707
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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