Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69527.1 | ABK70045.1 | MSMEG_0428 | MSMEG_4367 | Nitrite reductase [NAD(P)H] small subunit. | Formamidase; Identified by match to protein family HMM PF03069. | 0.913 |
| ABK69527.1 | ABK70993.1 | MSMEG_0428 | MSMEG_4138 | Nitrite reductase [NAD(P)H] small subunit. | Aliphatic nitrilase; Identified by match to protein family HMM PF00795. | 0.904 |
| ABK69527.1 | ABK71479.1 | MSMEG_0428 | MSMEG_1120 | Nitrite reductase [NAD(P)H] small subunit. | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Identified by match to protein family HMM PF00795. | 0.903 |
| ABK69527.1 | ABK72054.1 | MSMEG_0428 | MSMEG_5442 | Nitrite reductase [NAD(P)H] small subunit. | Glutamate dehydrogenase; Identified by match to protein family HMM PF00208; match to protein family HMM PF02812; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.903 |
| ABK69527.1 | ABK73400.1 | MSMEG_0428 | MSMEG_1459 | Nitrite reductase [NAD(P)H] small subunit. | Rieske [2Fe-2S] domain protein; Identified by match to protein family HMM PF00355. | 0.903 |
| ABK69527.1 | ABK73843.1 | MSMEG_0428 | MSMEG_0484 | Nitrite reductase [NAD(P)H] small subunit. | Formamidase; Identified by match to protein family HMM PF03069. | 0.913 |
| ABK69527.1 | ABK74508.1 | MSMEG_0428 | MSMEG_5335 | Nitrite reductase [NAD(P)H] small subunit. | Formamidase; Identified by match to protein family HMM PF03069. | 0.914 |
| ABK69527.1 | amiF | MSMEG_0428 | MSMEG_3403 | Nitrite reductase [NAD(P)H] small subunit. | Formamidase; Is an aliphatic amidase with a restricted substrate specificity, as it only hydrolyzes formamide; Belongs to the carbon-nitrogen hydrolase superfamily. Aliphatic amidase family. | 0.905 |
| ABK69527.1 | nirB | MSMEG_0428 | MSMEG_0427 | Nitrite reductase [NAD(P)H] small subunit. | Nitrite reductase [NAD(P)H], large subunit; Identified by match to protein family HMM PF00070; match to protein family HMM PF01077; match to protein family HMM PF03460; match to protein family HMM PF04324; match to protein family HMM PF07992; match to protein family HMM TIGR02374; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.999 |
| ABK70045.1 | ABK69527.1 | MSMEG_4367 | MSMEG_0428 | Formamidase; Identified by match to protein family HMM PF03069. | Nitrite reductase [NAD(P)H] small subunit. | 0.913 |
| ABK70045.1 | ABK70993.1 | MSMEG_4367 | MSMEG_4138 | Formamidase; Identified by match to protein family HMM PF03069. | Aliphatic nitrilase; Identified by match to protein family HMM PF00795. | 0.910 |
| ABK70045.1 | ABK71479.1 | MSMEG_4367 | MSMEG_1120 | Formamidase; Identified by match to protein family HMM PF03069. | Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Identified by match to protein family HMM PF00795. | 0.909 |
| ABK70045.1 | ABK72054.1 | MSMEG_4367 | MSMEG_5442 | Formamidase; Identified by match to protein family HMM PF03069. | Glutamate dehydrogenase; Identified by match to protein family HMM PF00208; match to protein family HMM PF02812; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. | 0.903 |
| ABK70045.1 | ABK73400.1 | MSMEG_4367 | MSMEG_1459 | Formamidase; Identified by match to protein family HMM PF03069. | Rieske [2Fe-2S] domain protein; Identified by match to protein family HMM PF00355. | 0.901 |
| ABK70045.1 | ABK73791.1 | MSMEG_4367 | MSMEG_2254 | Formamidase; Identified by match to protein family HMM PF03069. | Oxalate decarboxylase OxdC, putative; Identified by match to protein family HMM PF00190; match to protein family HMM PF07883. | 0.905 |
| ABK70045.1 | ABK73843.1 | MSMEG_4367 | MSMEG_0484 | Formamidase; Identified by match to protein family HMM PF03069. | Formamidase; Identified by match to protein family HMM PF03069. | 0.919 |
| ABK70045.1 | ABK74508.1 | MSMEG_4367 | MSMEG_5335 | Formamidase; Identified by match to protein family HMM PF03069. | Formamidase; Identified by match to protein family HMM PF03069. | 0.904 |
| ABK70045.1 | amiF | MSMEG_4367 | MSMEG_3403 | Formamidase; Identified by match to protein family HMM PF03069. | Formamidase; Is an aliphatic amidase with a restricted substrate specificity, as it only hydrolyzes formamide; Belongs to the carbon-nitrogen hydrolase superfamily. Aliphatic amidase family. | 0.943 |
| ABK70045.1 | nirB | MSMEG_4367 | MSMEG_0427 | Formamidase; Identified by match to protein family HMM PF03069. | Nitrite reductase [NAD(P)H], large subunit; Identified by match to protein family HMM PF00070; match to protein family HMM PF01077; match to protein family HMM PF03460; match to protein family HMM PF04324; match to protein family HMM PF07992; match to protein family HMM TIGR02374; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.902 |
| ABK70993.1 | ABK69527.1 | MSMEG_4138 | MSMEG_0428 | Aliphatic nitrilase; Identified by match to protein family HMM PF00795. | Nitrite reductase [NAD(P)H] small subunit. | 0.904 |
page 1 of 5