Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK69650.1 | ABK73695.1 | MSMEG_0743 | MSMEG_1846 | Xanthine dehydrogenase; Identified by match to protein family HMM PF02625. | Polysulphide reductase, NrfD; Identified by match to protein family HMM PF03916. | 0.664 |
| ABK69650.1 | ABK75824.1 | MSMEG_0743 | MSMEG_3411 | Xanthine dehydrogenase; Identified by match to protein family HMM PF02625. | MOSC domain protein; Identified by match to protein family HMM PF03473. | 0.820 |
| ABK69650.1 | fdhD | MSMEG_0743 | MSMEG_0165 | Xanthine dehydrogenase; Identified by match to protein family HMM PF02625. | Formate dehydrogenase family protein accessory protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.783 |
| ABK69650.1 | fdhD-2 | MSMEG_0743 | MSMEG_4669 | Xanthine dehydrogenase; Identified by match to protein family HMM PF02625. | Formate dehydrogenase family protein accessory protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.779 |
| ABK69650.1 | iscS | MSMEG_0743 | MSMEG_1242 | Xanthine dehydrogenase; Identified by match to protein family HMM PF02625. | Cysteine desulfurase IscS; Identified by match to protein family HMM PF00266. | 0.775 |
| ABK69650.1 | moaC | MSMEG_0743 | MSMEG_5703 | Xanthine dehydrogenase; Identified by match to protein family HMM PF02625. | Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. | 0.808 |
| ABK69650.1 | moaE | MSMEG_0743 | MSMEG_5701 | Xanthine dehydrogenase; Identified by match to protein family HMM PF02625. | Molybdopterin converting factor, subunit 2; Identified by match to protein family HMM PF02391. | 0.650 |
| ABK69650.1 | modB | MSMEG_0743 | MSMEG_2015 | Xanthine dehydrogenase; Identified by match to protein family HMM PF02625. | Molybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.571 |
| ABK71526.1 | ABK74909.1 | MSMEG_3409 | MSMEG_3410 | Oxidoreductase; Identified by match to protein family HMM PF00107. | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | 0.780 |
| ABK71526.1 | ABK75824.1 | MSMEG_3409 | MSMEG_3411 | Oxidoreductase; Identified by match to protein family HMM PF00107. | MOSC domain protein; Identified by match to protein family HMM PF03473. | 0.541 |
| ABK73695.1 | ABK69650.1 | MSMEG_1846 | MSMEG_0743 | Polysulphide reductase, NrfD; Identified by match to protein family HMM PF03916. | Xanthine dehydrogenase; Identified by match to protein family HMM PF02625. | 0.664 |
| ABK73695.1 | ABK75824.1 | MSMEG_1846 | MSMEG_3411 | Polysulphide reductase, NrfD; Identified by match to protein family HMM PF03916. | MOSC domain protein; Identified by match to protein family HMM PF03473. | 0.675 |
| ABK73695.1 | fdhD | MSMEG_1846 | MSMEG_0165 | Polysulphide reductase, NrfD; Identified by match to protein family HMM PF03916. | Formate dehydrogenase family protein accessory protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.837 |
| ABK73695.1 | fdhD-2 | MSMEG_1846 | MSMEG_4669 | Polysulphide reductase, NrfD; Identified by match to protein family HMM PF03916. | Formate dehydrogenase family protein accessory protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. | 0.836 |
| ABK73695.1 | iscS | MSMEG_1846 | MSMEG_1242 | Polysulphide reductase, NrfD; Identified by match to protein family HMM PF03916. | Cysteine desulfurase IscS; Identified by match to protein family HMM PF00266. | 0.593 |
| ABK73695.1 | moaC | MSMEG_1846 | MSMEG_5703 | Polysulphide reductase, NrfD; Identified by match to protein family HMM PF03916. | Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. | 0.679 |
| ABK73695.1 | moaE | MSMEG_1846 | MSMEG_5701 | Polysulphide reductase, NrfD; Identified by match to protein family HMM PF03916. | Molybdopterin converting factor, subunit 2; Identified by match to protein family HMM PF02391. | 0.524 |
| ABK73695.1 | modB | MSMEG_1846 | MSMEG_2015 | Polysulphide reductase, NrfD; Identified by match to protein family HMM PF03916. | Molybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.433 |
| ABK74909.1 | ABK71526.1 | MSMEG_3410 | MSMEG_3409 | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | Oxidoreductase; Identified by match to protein family HMM PF00107. | 0.780 |
| ABK74909.1 | ABK75824.1 | MSMEG_3410 | MSMEG_3411 | Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440. | MOSC domain protein; Identified by match to protein family HMM PF03473. | 0.540 |
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