Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK71199.1 | ABK72677.1 | MSMEG_6723 | MSMEG_3422 | Conserved hypothetical protein. | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; Identified by match to protein family HMM PF00899; match to protein family HMM PF02826. | 0.735 |
| ABK71199.1 | ABK74628.1 | MSMEG_6723 | MSMEG_0171 | Conserved hypothetical protein. | Histone deacetylase superfamily protein; Identified by match to protein family HMM PF00850. | 0.783 |
| ABK71987.1 | ABK72677.1 | MSMEG_3423 | MSMEG_3422 | Probable IclR family protein regulator; Identified by match to protein family HMM PF01614. | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; Identified by match to protein family HMM PF00899; match to protein family HMM PF02826. | 0.721 |
| ABK71987.1 | ABK73745.1 | MSMEG_3423 | MSMEG_3424 | Probable IclR family protein regulator; Identified by match to protein family HMM PF01614. | Transcriptional regulator, MerR family protein; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. | 0.686 |
| ABK72677.1 | ABK71199.1 | MSMEG_3422 | MSMEG_6723 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; Identified by match to protein family HMM PF00899; match to protein family HMM PF02826. | Conserved hypothetical protein. | 0.735 |
| ABK72677.1 | ABK71987.1 | MSMEG_3422 | MSMEG_3423 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; Identified by match to protein family HMM PF00899; match to protein family HMM PF02826. | Probable IclR family protein regulator; Identified by match to protein family HMM PF01614. | 0.721 |
| ABK72677.1 | ABK73745.1 | MSMEG_3422 | MSMEG_3424 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; Identified by match to protein family HMM PF00899; match to protein family HMM PF02826. | Transcriptional regulator, MerR family protein; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. | 0.538 |
| ABK72677.1 | ABK74628.1 | MSMEG_3422 | MSMEG_0171 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; Identified by match to protein family HMM PF00899; match to protein family HMM PF02826. | Histone deacetylase superfamily protein; Identified by match to protein family HMM PF00850. | 0.691 |
| ABK72677.1 | ABK74733.1 | MSMEG_3422 | MSMEG_0949 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; Identified by match to protein family HMM PF00899; match to protein family HMM PF02826. | HAD-superfamily protein subfamily protein IB hydrolase, TIGR01490; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01488; match to protein family HMM TIGR01490. | 0.542 |
| ABK72677.1 | ABK74933.1 | MSMEG_3422 | MSMEG_3421 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; Identified by match to protein family HMM PF00899; match to protein family HMM PF02826. | Inner membrane metabolite transport protein YdfJ; Identified by match to protein family HMM PF00083; match to protein family HMM PF07690. | 0.560 |
| ABK72677.1 | ABK75362.1 | MSMEG_3422 | MSMEG_4957 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; Identified by match to protein family HMM PF00899; match to protein family HMM PF02826. | Homoserine dehydrogenase; Identified by match to protein family HMM PF00742; match to protein family HMM PF01842; match to protein family HMM PF03447. | 0.511 |
| ABK72677.1 | ABK76001.1 | MSMEG_3422 | MSMEG_3420 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; Identified by match to protein family HMM PF00899; match to protein family HMM PF02826. | Gluconate 5-dehydrogenase; Identified by match to protein family HMM PF00106. | 0.512 |
| ABK72677.1 | pcaB | MSMEG_3422 | MSMEG_2603 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; Identified by match to protein family HMM PF00899; match to protein family HMM PF02826. | 3-carboxy-cis,cis-muconate cycloisomerase; Identified by match to protein family HMM PF00206; match to protein family HMM TIGR02426. | 0.546 |
| ABK72677.1 | serC | MSMEG_3422 | MSMEG_5684 | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; Identified by match to protein family HMM PF00899; match to protein family HMM PF02826. | Phosphoserine aminotransferase, putative; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.723 |
| ABK73745.1 | ABK71987.1 | MSMEG_3424 | MSMEG_3423 | Transcriptional regulator, MerR family protein; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. | Probable IclR family protein regulator; Identified by match to protein family HMM PF01614. | 0.686 |
| ABK73745.1 | ABK72677.1 | MSMEG_3424 | MSMEG_3422 | Transcriptional regulator, MerR family protein; Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity. | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; Identified by match to protein family HMM PF00899; match to protein family HMM PF02826. | 0.538 |
| ABK74628.1 | ABK71199.1 | MSMEG_0171 | MSMEG_6723 | Histone deacetylase superfamily protein; Identified by match to protein family HMM PF00850. | Conserved hypothetical protein. | 0.783 |
| ABK74628.1 | ABK72677.1 | MSMEG_0171 | MSMEG_3422 | Histone deacetylase superfamily protein; Identified by match to protein family HMM PF00850. | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; Identified by match to protein family HMM PF00899; match to protein family HMM PF02826. | 0.691 |
| ABK74733.1 | ABK72677.1 | MSMEG_0949 | MSMEG_3422 | HAD-superfamily protein subfamily protein IB hydrolase, TIGR01490; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01488; match to protein family HMM TIGR01490. | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; Identified by match to protein family HMM PF00899; match to protein family HMM PF02826. | 0.542 |
| ABK74733.1 | serC | MSMEG_0949 | MSMEG_5684 | HAD-superfamily protein subfamily protein IB hydrolase, TIGR01490; Identified by match to protein family HMM PF00702; match to protein family HMM TIGR01488; match to protein family HMM TIGR01490. | Phosphoserine aminotransferase, putative; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. | 0.776 |
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