Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ABK70835.1 | ABK71358.1 | MSMEG_3525 | MSMEG_3427 | Transcriptional regulator, XRE family protein; Identified by match to protein family HMM PF01381. | Metal dependent hydrolase; Identified by match to protein family HMM PF00753. | 0.415 |
| ABK71358.1 | ABK70835.1 | MSMEG_3427 | MSMEG_3525 | Metal dependent hydrolase; Identified by match to protein family HMM PF00753. | Transcriptional regulator, XRE family protein; Identified by match to protein family HMM PF01381. | 0.415 |
| ABK71358.1 | ABK71737.1 | MSMEG_3427 | MSMEG_5279 | Metal dependent hydrolase; Identified by match to protein family HMM PF00753. | Conserved hypothetical protein. | 0.458 |
| ABK71358.1 | ABK72085.1 | MSMEG_3427 | MSMEG_3425 | Metal dependent hydrolase; Identified by match to protein family HMM PF00753. | TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | 0.478 |
| ABK71358.1 | ABK72412.1 | MSMEG_3427 | MSMEG_3428 | Metal dependent hydrolase; Identified by match to protein family HMM PF00753. | Conserved hypothetical protein. | 0.636 |
| ABK71358.1 | ABK73066.1 | MSMEG_3427 | MSMEG_4155 | Metal dependent hydrolase; Identified by match to protein family HMM PF00753. | Identified by match to protein family HMM PF00589; match to protein family HMM PF02899; Belongs to the 'phage' integrase family. | 0.416 |
| ABK71358.1 | ABK73818.1 | MSMEG_3427 | MSMEG_4589 | Metal dependent hydrolase; Identified by match to protein family HMM PF00753. | Rhodanese domain protein/cystathionine beta-lyase. | 0.464 |
| ABK71358.1 | ABK74474.1 | MSMEG_3427 | MSMEG_3426 | Metal dependent hydrolase; Identified by match to protein family HMM PF00753. | Short chain dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.549 |
| ABK71358.1 | ABK75647.1 | MSMEG_3427 | MSMEG_4156 | Metal dependent hydrolase; Identified by match to protein family HMM PF00753. | Putative transposase; Identified by match to protein family HMM PF00589. | 0.427 |
| ABK71358.1 | acpP | MSMEG_3427 | MSMEG_4326 | Metal dependent hydrolase; Identified by match to protein family HMM PF00753. | Acyl carrier protein; Acyl carrier protein involved in meromycolate extension. | 0.410 |
| ABK71358.1 | ybeY | MSMEG_3427 | MSMEG_4496 | Metal dependent hydrolase; Identified by match to protein family HMM PF00753. | Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.413 |
| ABK71737.1 | ABK71358.1 | MSMEG_5279 | MSMEG_3427 | Conserved hypothetical protein. | Metal dependent hydrolase; Identified by match to protein family HMM PF00753. | 0.458 |
| ABK71737.1 | acpP | MSMEG_5279 | MSMEG_4326 | Conserved hypothetical protein. | Acyl carrier protein; Acyl carrier protein involved in meromycolate extension. | 0.413 |
| ABK71737.1 | ybeY | MSMEG_5279 | MSMEG_4496 | Conserved hypothetical protein. | Conserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.665 |
| ABK72085.1 | ABK71358.1 | MSMEG_3425 | MSMEG_3427 | TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | Metal dependent hydrolase; Identified by match to protein family HMM PF00753. | 0.478 |
| ABK72085.1 | ABK74474.1 | MSMEG_3425 | MSMEG_3426 | TetR-family protein transcriptional regulator; Identified by match to protein family HMM PF00440. | Short chain dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.793 |
| ABK72412.1 | ABK71358.1 | MSMEG_3428 | MSMEG_3427 | Conserved hypothetical protein. | Metal dependent hydrolase; Identified by match to protein family HMM PF00753. | 0.636 |
| ABK72412.1 | ABK74474.1 | MSMEG_3428 | MSMEG_3426 | Conserved hypothetical protein. | Short chain dehydrogenase; Identified by match to protein family HMM PF00106; match to protein family HMM PF01370; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.608 |
| ABK73066.1 | ABK71358.1 | MSMEG_4155 | MSMEG_3427 | Identified by match to protein family HMM PF00589; match to protein family HMM PF02899; Belongs to the 'phage' integrase family. | Metal dependent hydrolase; Identified by match to protein family HMM PF00753. | 0.416 |
| ABK73066.1 | ABK75647.1 | MSMEG_4155 | MSMEG_4156 | Identified by match to protein family HMM PF00589; match to protein family HMM PF02899; Belongs to the 'phage' integrase family. | Putative transposase; Identified by match to protein family HMM PF00589. | 0.954 |
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