STRINGSTRING
ABK71541.1 ABK71541.1 ABK70403.1 ABK70403.1 ABK73697.1 ABK73697.1 ABK75014.1 ABK75014.1 ABK75300.1 ABK75300.1 ABK74951.1 ABK74951.1 ABK75242.1 ABK75242.1 ABK75123.1 ABK75123.1 ABK75124.1 ABK75124.1 ABK69701.1 ABK69701.1 ABK70851.1 ABK70851.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABK71541.1Conserved hypothetical protein. (192 aa)    
Predicted Functional Partners:
ABK70403.1
Conserved hypothetical protein.
  
  
 0.954
ABK73697.1
Glycosyl hydrolase family protein 76; Identified by match to protein family HMM PF03663.
  
  
 0.700
ABK75014.1
Conserved hypothetical protein; Identified by match to protein family HMM PF05762.
     
 0.638
ABK75300.1
Conserved hypothetical protein.
 
    0.554
ABK74951.1
Peptidyl-prolyl cis-trans isomerase, fkbp-type domain protein; Identified by match to protein family HMM PF00254.
  
    0.534
ABK75242.1
Probable antibiotic-transport integral membrane leucine and valine rich protein abc transporter.
  
  
 0.459
ABK75123.1
Identified by match to protein family HMM PF01381; match to protein family HMM PF07883.
  
 
 0.423
ABK75124.1
Identified by match to protein family HMM PF01381; match to protein family HMM PF06114.
  
 
 0.423
ABK69701.1
Transcriptional regulator, XRE family protein; Identified by match to protein family HMM PF01381.
  
 
 0.422
ABK70851.1
DNA-binding protein.
  
 
 0.422
Your Current Organism:
Mycolicibacterium smegmatis
NCBI taxonomy Id: 246196
Other names: M. smegmatis MC2 155, Mycobacterium smegmatis MC2 155, Mycolicibacterium smegmatis MC2 155
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