Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABK70371.1 | ABK73216.1 | MSMEG_4176 | MSMEG_3439 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.400 |
ABK72069.1 | ABK72151.1 | MSMEG_5264 | MSMEG_1644 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.589 |
ABK72069.1 | ABK73201.1 | MSMEG_5264 | MSMEG_6497 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.629 |
ABK72069.1 | ABK73216.1 | MSMEG_5264 | MSMEG_3439 | Conserved hypothetical protein. | Hypothetical protein; Identified by Glimmer2; putative. | 0.499 |
ABK72069.1 | ABK74296.1 | MSMEG_5264 | MSMEG_4691 | Conserved hypothetical protein. | HNH nuclease. | 0.411 |
ABK72151.1 | ABK72069.1 | MSMEG_1644 | MSMEG_5264 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.589 |
ABK72151.1 | ABK73201.1 | MSMEG_1644 | MSMEG_6497 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.728 |
ABK72151.1 | ABK73216.1 | MSMEG_1644 | MSMEG_3439 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.417 |
ABK73201.1 | ABK72069.1 | MSMEG_6497 | MSMEG_5264 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.629 |
ABK73201.1 | ABK72151.1 | MSMEG_6497 | MSMEG_1644 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.728 |
ABK73201.1 | ABK73216.1 | MSMEG_6497 | MSMEG_3439 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.430 |
ABK73216.1 | ABK70371.1 | MSMEG_3439 | MSMEG_4176 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.400 |
ABK73216.1 | ABK72069.1 | MSMEG_3439 | MSMEG_5264 | Hypothetical protein; Identified by Glimmer2; putative. | Conserved hypothetical protein. | 0.499 |
ABK73216.1 | ABK72151.1 | MSMEG_3439 | MSMEG_1644 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.417 |
ABK73216.1 | ABK73201.1 | MSMEG_3439 | MSMEG_6497 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.430 |
ABK73216.1 | ABK74203.1 | MSMEG_3439 | MSMEG_2710 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.412 |
ABK73216.1 | ABK74296.1 | MSMEG_3439 | MSMEG_4691 | Hypothetical protein; Identified by Glimmer2; putative. | HNH nuclease. | 0.452 |
ABK73216.1 | ABK76093.1 | MSMEG_3439 | MSMEG_3438 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.585 |
ABK73216.1 | sdaA | MSMEG_3439 | MSMEG_3440 | Hypothetical protein; Identified by Glimmer2; putative. | L-serine ammonia-lyase; Identified by similarity to SP:P16095; match to protein family HMM PF03313; match to protein family HMM PF03315; match to protein family HMM TIGR00720; Belongs to the iron-sulfur dependent L-serine dehydratase family. | 0.452 |
ABK74203.1 | ABK73216.1 | MSMEG_2710 | MSMEG_3439 | Hypothetical protein; Identified by Glimmer2; putative. | Hypothetical protein; Identified by Glimmer2; putative. | 0.412 |
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